RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 TYW5A2RUC4 315 aaKnown RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 CNTN5O94779 1100 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 CALB1P05937 261 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 PDGFRAP16234 1089 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 POLR2EP19388 210 aaKnown RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 MZF1P28698 734 aaPredicted RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 PLK1P53350 603 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 UBASH3AP57075 661 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 CDH18Q13634 790 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 ARID5BQ14865 1188 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 E2F5Q15329 346 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 NFKBIBQ15653 356 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 CSRP2Q16527 193 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 ALFQ53S48 1182 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 RABGAP1LQ5R372 815 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 HGSNATQ68CP4 663 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 WDR59Q6PJI9 974 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 SERPINA13PQ6UXR4 307 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 C11orf74Q86VG3 221 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 FAM131BQ86XD5 332 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 MCOLN2Q8IZK6 566 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 GPR161Q8N6U8 529 aaKnown RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 ZNF366Q8N895 744 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 KDM1BQ8NB78 822 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 RMDN1Q96DB5 314 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 RPRD1AQ96P16 312 aaPredicted RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 SIK2Q9H0K1 926 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 HAUS4Q9H6D7 363 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 SEMA4GQ9NTN9 838 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 TMEM51Q9NW97 253 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 KIAA1522Q9P206 1035 aaPredicted RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 USP36Q9P275 1121 aaKnown RBP14.65□□□□□ -0.06
COL9A2-208ENST00000488463 TBC1D30Q9Y2I9 924 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 PCDHGA5Q9Y5G8 931 aa14.65□□□□□ -0.06
COL9A2-208ENST00000488463 A0A1W2PQJ5 194 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 BCLAF3A2AJT9 711 aaKnown RBP14.64□□□□□ -0.07
COL9A2-208ENST00000488463 SIGLEC16A6NMB1 481 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 H0Y626 953 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 DDX3XO00571 662 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL9A2-208ENST00000488463 RHOBTB1O94844 696 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 IGLV3-19P01714 112 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 ATP5BP06576 529 aaKnown RBP14.64□□□□□ -0.07
COL9A2-208ENST00000488463 EPHX1P07099 455 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 CCDC172P0C7W6 258 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 KRT3P12035 628 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 HDAC4P56524 1084 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 RPL7AP62424 266 aaKnown RBP14.64□□□□□ -0.07
COL9A2-208ENST00000488463 ATP11AP98196 1134 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 STARD3Q14849 445 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 ELF2Q15723 593 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 ASIC2Q16515 512 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 STRADAQ7RTN6 431 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 DNAAF5Q86Y56 855 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 TMPRSS6Q8IU80 811 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 PGBD3Q8N328 593 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 HAPLN3Q96S86 360 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 ANP32EQ9BTT0 268 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 MAGEB5Q9BZ81 275 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 MTG2Q9H4K7 406 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 PRSS16Q9NQE7 514 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 ITM2CQ9NQX7 267 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 PLA2G4CQ9UP65 541 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 NEU3Q9UQ49 428 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 ITIH6Q6UXX5 1313 aa14.64□□□□□ -0.07
COL9A2-208ENST00000488463 CLDN11O75508 207 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 ASLP04424 464 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 ZNF806P0C7X5 589 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 RRM1P23921 792 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SDC4P31431 198 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 MPLP40238 635 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 PTGER3P43115 390 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 OGDHQ02218 1023 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 NRG1Q02297 640 aaPredicted RBP14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SLC12A1Q13621 1099 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 CCDC6Q16204 474 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 HNRNPA1L2Q32P51 320 aaKnown RBP14.63□□□□□ -0.07
COL9A2-208ENST00000488463 FNDC3BQ53EP0 1204 aaKnown RBP14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SPDYCQ5MJ68 293 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 MANEALQ5VSG8 457 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SFMBT2Q5VUG0 894 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 LRSAM1Q6UWE0 723 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 PRR23CQ6ZRP0 262 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SND1Q7KZF4 910 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■■■□ 20.7
COL9A2-208ENST00000488463 OR2T3Q8NH03 318 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 VCPIP1Q96JH7 1222 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SPACA7Q96KW9 195 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 FEM1AQ9BSK4 669 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SMOC1Q9H4F8 434 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 PRDM16Q9HAZ2 1276 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 RXFP3Q9NSD7 469 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SEPT11Q9NVA2 429 aaKnown RBP14.63□□□□□ -0.07
COL9A2-208ENST00000488463 IFNKQ9P0W0 207 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 SLCO3A1Q9UIG8 710 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 USP18Q9UMW8 372 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 CYP8B1Q9UNU6 501 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 ERVW-1Q9UQF0 538 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 PAXBP1Q9Y5B6 917 aa14.63□□□□□ -0.07
COL9A2-208ENST00000488463 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.63□□□□□ -0.07
COL9A2-208ENST00000488463 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms