RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 COQ6Q9Y2Z9 468 aa5.72□□□□□ -1.49
SF1-217ENST00000486960 PCDHA5Q9Y5H7 936 aa5.72□□□□□ -1.49
SF1-217ENST00000486960 CLDN16Q9Y5I7 305 aa5.72□□□□□ -1.49
SF1-217ENST00000486960 BACE2Q9Y5Z0 518 aa5.72□□□□□ -1.49
SF1-217ENST00000486960 POMT1Q9Y6A1 747 aa5.72□□□□□ -1.49
SF1-217ENST00000486960 NOTCH2Q04721 2471 aa5.72□□□□□ -1.49
SF1-217ENST00000486960 UTP20O75691 2785 aaKnown RBP5.72□□□□□ -1.49
SF1-217ENST00000486960 CACNA1IQ9P0X4 2223 aa5.71□□□□□ -1.49
SF1-217ENST00000486960 A0A0G2JLL6 359 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 SYCE3A1L190 88 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 A4D1N5 150 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ISM1B1AKI9 464 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 TCP10L2B9ZVM9 353 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 F8W8V4 182 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 RBAK-RBAKDNI3L0D1 243 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 CD3EAPO15446 510 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 YKT6O15498 198 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ADAM20O43506 726 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 KCNJ13O60928 360 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ZC3H11AO75152 810 aaKnown RBP eCLIP5.71□□□□□ -1.5
SF1-217ENST00000486960 TNFRSF6BO95407 300 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 LARGE1O95461 756 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 IL2RAP01589 272 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 LMNAP02545 664 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 CLEC3BP05452 202 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 PRR35P0CG20 571 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 OSMP13725 252 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 RXRAP19793 462 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 EIF2S2P20042 333 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 FGFR2P21802 821 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 GCH1P30793 250 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 CIITAP33076 1130 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 PPARGP37231 505 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 TXLNAP40222 546 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 CCT6AP40227 531 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 TXKP42681 527 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 RABIFP47224 123 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 MECP2P51608 486 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 CCNHP51946 323 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 SEC24CP53992 1094 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 MAP3K7CLP57077 242 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 TFAP4Q01664 338 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 FMO1Q01740 532 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.71□□□□□ -1.5
SF1-217ENST00000486960 PPIGQ13427 754 aaKnown RBP eCLIP5.71□□□□□ -1.56e-11■□□□□ 9.5
SF1-217ENST00000486960 MTX1Q13505 466 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 GPR68Q15743 365 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 BAK1Q16611 211 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ARHGAP44Q17R89 818 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 SPRED3Q2MJR0 410 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ERCC6LQ2NKX8 1250 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 LINC01559Q495D7 138 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 XKR3Q5GH77 459 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 PPM1JQ5JR12 505 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 TOR2AQ5JU69 321 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ATXN7L2Q5T6C5 722 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 CYP4A22Q5TCH4 519 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 SCARA3Q6AZY7 606 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 TIGD7Q6NT04 549 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 PSRC1Q6PGN9 363 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 CLEC2AQ6UVW9 174 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ISLR2Q6UXK2 745 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 FAM83HQ6ZRV2 1179 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 PRRT2Q7Z6L0 340 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 WDR49Q8IV35 697 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 CCDC117Q8IWD4 279 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 PALM2Q8IXS6 379 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 EXOC6Q8TAG9 804 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 MIPOL1Q8TD10 442 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 SLC26A7Q8TE54 656 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 RIN2Q8WYP3 895 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 FRAT1Q92837 279 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 RAB7BQ96AH8 199 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 EID2BQ96D98 161 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 SUCLG2Q96I99 432 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 CMTM3Q96MX0 182 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 SLC2A13Q96QE2 648 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 TWNKQ96RR1 684 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 OSMRQ99650 979 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 MTRQ99707 1265 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 KCNJ15Q99712 375 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ZKSCAN3Q9BRR0 538 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 CELF4Q9BZC1 486 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 TRIM2Q9C040 744 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ZCCHC2Q9C0B9 1178 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 VPS16Q9H269 839 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 DENND2DQ9H6A0 471 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 HAUS4Q9H6D7 363 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 MRPL44Q9H9J2 332 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 MKNK2Q9HBH9 465 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 TMPRSS4Q9NRS4 437 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 GJB4Q9NTQ9 266 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 MRPL15Q9P015 296 aaKnown RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 ZNF70Q9UC06 446 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 MBD1Q9UIS9 605 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 TLK1Q9UKI8 766 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ANGPTL2Q9UKU9 493 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 BAG5Q9UL15 447 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 AKT3Q9Y243 479 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms