RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 TMEM245Q9H330 911 aa13.58□□□□□ -0.24
SF1-216ENST00000486867 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
SF1-216ENST00000486867 TMPRSS4Q9NRS4 437 aa13.58□□□□□ -0.24
SF1-216ENST00000486867 POLR3BQ9NW08 1133 aaPredicted RBP13.58□□□□□ -0.24
SF1-216ENST00000486867 KIAA1522Q9P206 1035 aaPredicted RBP13.58□□□□□ -0.24
SF1-216ENST00000486867 PPARGC1AQ9UBK2 798 aaKnown RBP13.58□□□□□ -0.24
SF1-216ENST00000486867 VANGL2Q9ULK5 521 aa13.58□□□□□ -0.24
SF1-216ENST00000486867 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.24
SF1-216ENST00000486867 SDK1Q7Z5N4 2213 aa13.58□□□□□ -0.24
SF1-216ENST00000486867 MYO15AQ9UKN7 3530 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 AKR1B15C9JRZ8 316 aaPredicted RBP13.57□□□□□ -0.24
SF1-216ENST00000486867 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
SF1-216ENST00000486867 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
SF1-216ENST00000486867 ADKP55263 362 aaKnown RBP13.57□□□□□ -0.24
SF1-216ENST00000486867 SEMA3BQ13214 749 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 CDH18Q13634 790 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 ZNF234Q14588 700 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 ACAP1Q15027 740 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 PTPRNQ16849 979 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 CDO1Q16878 200 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 PLEKHG6Q3KR16 790 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 ARL13BQ3SXY8 428 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 MBLAC2Q68D91 279 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 CCDC185Q8N715 623 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 NIPA2Q8N8Q9 360 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 MYO19Q96H55 970 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 RPRD1AQ96P16 312 aaPredicted RBP13.57□□□□□ -0.24
SF1-216ENST00000486867 CHP1Q99653 195 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 NCAPGQ9BPX3 1015 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 TRIM7Q9C029 511 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 SIK2Q9H0K1 926 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 EPC1Q9H2F5 836 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 ZNHIT6Q9NWK9 470 aaKnown RBP13.57□□□□□ -0.24
SF1-216ENST00000486867 STIM2Q9P246 746 aa13.57□□□□□ -0.24
SF1-216ENST00000486867 E9PAM4 449 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 ASLP04424 464 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 ATP5BP06576 529 aaKnown RBP13.56□□□□□ -0.24
SF1-216ENST00000486867 L1CAMP32004 1257 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 GGCXP38435 758 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 FNTBP49356 437 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 GALCP54803 685 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 NUMA1Q14980 2115 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 TSR1Q2NL82 804 aaKnown RBP13.56□□□□□ -0.24
SF1-216ENST00000486867 ALFQ53S48 1182 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 PITRM1Q5JRX3 1037 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 CCDC122Q5T0U0 273 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 CYP4V2Q6ZWL3 525 aaPredicted RBP13.56□□□□□ -0.24
SF1-216ENST00000486867 SETD3Q86TU7 594 aaPredicted RBP13.56□□□□□ -0.24
SF1-216ENST00000486867 CHPFQ8IZ52 775 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 CARNMT1Q8N4J0 409 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 SUMF1Q8NBK3 374 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 OR52K2Q8NGK3 314 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 HHIPQ96QV1 700 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 PHOX2BQ99453 314 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.56□□□□□ -0.24
SF1-216ENST00000486867 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 ZDHHC4Q9NPG8 344 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 FAM86C1Q9NVL1 165 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 OR12D3Q9UGF7 316 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 FZD10Q9ULW2 581 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 SNX10Q9Y5X0 201 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 STON1Q9Y6Q2 735 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 R4GN57 208 aa13.56□□□□□ -0.24
SF1-216ENST00000486867 USP34Q70CQ2 3546 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 GON4LQ3T8J9 2241 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 CXorf51AA0A1B0GTR3 108 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 EIF3CLB5ME19 914 aaKnown RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 H0Y626 953 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 CNTN5O94779 1100 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 HOXB2P14652 356 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 CDC25BP30305 580 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 HTR7P34969 479 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 PCK1P35558 622 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 CSKP41240 450 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 IL12RB1P42701 662 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 CAMK2GQ13555 558 aaPredicted RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 LRRC31Q6UY01 552 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 ZNF783Q6ZMS7 281 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 SLFN11Q7Z7L1 901 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 NLRP14Q86W24 1093 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 CIR1Q86X95 450 aaPredicted RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 PSTKQ8IV42 348 aaKnown RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 CCDC117Q8IWD4 279 aaPredicted RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 MDGA1Q8NFP4 955 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 TSTD1Q8NFU3 115 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 ATRIPQ8WXE1 791 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 SORCS1Q8WY21 1168 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 ARHGEF26Q96DR7 871 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 MRGPRX3Q96LB0 322 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 PANX2Q96RD6 677 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 EIF3CQ99613 913 aaKnown RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 FEM1AQ9BSK4 669 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 NHEJ1Q9H9Q4 299 aaPredicted RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 POLMQ9NP87 494 aaPredicted RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
SF1-216ENST00000486867 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
SF1-216ENST00000486867 DMDP11532 3685 aa13.54□□□□□ -0.24
SF1-216ENST00000486867 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.54□□□□□ -0.24
SF1-216ENST00000486867 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms