RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PRMT1Q99873 361 aaKnown RBP18.22■□□□□ 0.51
COL6A1-204ENST00000486023 C11orf70Q9BRQ4 267 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 GTPBP2Q9BX10 602 aaKnown RBP18.22■□□□□ 0.51
COL6A1-204ENST00000486023 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 MIR1-1HGQ9H1L0 117 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 HSD3B7Q9H2F3 369 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 TMPRSS4Q9NRS4 437 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 WSB2Q9NYS7 404 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-204ENST00000486023 RRN3Q9NYV6 651 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 SLCO3A1Q9UIG8 710 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 PILRBQ9UKJ0 227 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 ERVW-1Q9UQF0 538 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 RALGAPA1Q6GYQ0 2036 aa18.22■□□□□ 0.51
COL6A1-204ENST00000486023 THADAQ6YHU6 1953 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 SPAG17Q6Q759 2223 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 LRRC10BA6NIK2 292 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 MEI4A8MW99 385 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 TTC34A8MYJ7 566 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 GJB6O95452 261 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 DNTTP04053 509 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 ASLP04424 464 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 ZNF165P49910 485 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 IRAK1P51617 712 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 ATXN3P54252 364 aaPredicted RBP18.21■□□□□ 0.51
COL6A1-204ENST00000486023 ECT2LQ008S8 904 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 FOXK2Q01167 660 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 CDO1Q16878 200 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 SLC25A52Q3SY17 297 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 PPM1JQ5JR12 505 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 SYCP2LQ5T4T6 812 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 OTUD1Q5VV17 481 aaPredicted RBP18.21■□□□□ 0.51
COL6A1-204ENST00000486023 APTXQ7Z2E3 356 aaKnown RBP18.21■□□□□ 0.51
COL6A1-204ENST00000486023 PCDHB18PQ96TA0 734 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 NUP58Q9BVL2 599 aa18.21■□□□□ 0.51
COL6A1-204ENST00000486023 SYCE3A1L190 88 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 SRGAP2O75044 1071 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 SIN3BO75182 1162 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 F9P00740 461 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 CYP1A1P04798 512 aaPredicted RBP18.2■□□□□ 0.5
COL6A1-204ENST00000486023 OXTRP30559 389 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 CXCR3P49682 368 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 STK19P49842 368 aaPredicted RBP18.2■□□□□ 0.5
COL6A1-204ENST00000486023 RPS14P62263 151 aaKnown RBP18.2■□□□□ 0.5
COL6A1-204ENST00000486023 PLEKHG6Q3KR16 790 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 ACCSLQ4AC99 568 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 FILIP1LQ4L180 1135 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 TTC39BQ5VTQ0 682 aaPredicted RBP18.2■□□□□ 0.5
COL6A1-204ENST00000486023 METTL3Q86U44 580 aaKnown RBP18.2■□□□□ 0.5
COL6A1-204ENST00000486023 SNX19Q92543 992 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 FOXJ1Q92949 421 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 ZNF419Q96HQ0 510 aaPredicted RBP18.2■□□□□ 0.5
COL6A1-204ENST00000486023 MRGPRX3Q96LB0 322 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 ERGIC2Q96RQ1 377 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 TMEM9BQ9NQ34 198 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 ANLNQ9NQW6 1124 aa18.2■□□□□ 0.5
COL6A1-204ENST00000486023 USP36Q9P275 1121 aaKnown RBP18.2■□□□□ 0.5
COL6A1-204ENST00000486023 A0A1B0GVM2 712 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 TCAF2A6NFQ2 919 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 ENGP17813 658 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 NNMTP40261 264 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 NSFP46459 744 aaKnown RBP18.19■□□□□ 0.5
COL6A1-204ENST00000486023 GFPT1Q06210 699 aaPredicted RBP18.19■□□□□ 0.5
COL6A1-204ENST00000486023 DUOXA1Q1HG43 343 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 WDR45BQ5MNZ6 344 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 BRMS1LQ5PSV4 323 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 TRNP1Q6NT89 227 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 LRSAM1Q6UWE0 723 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 FAM131BQ86XD5 332 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 RXFP2Q8WXD0 754 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 MYO19Q96H55 970 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 MUC3BQ9H195 1237 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 ARHGEF38Q9NXL2 777 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 ADAM22Q9P0K1 906 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 TMEM59LQ9UK28 342 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 SLC6A14Q9UN76 642 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 DAAM1Q9Y4D1 1078 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 PAXBP1Q9Y5B6 917 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 LAMA1P25391 3075 aa18.19■□□□□ 0.5
COL6A1-204ENST00000486023 FAM47DPA6NHR8 397 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 BNIP3LO60238 219 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 RNASEH1O60930 286 aaKnown RBP18.18■□□□□ 0.5
COL6A1-204ENST00000486023 CNTN5O94779 1100 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 MMP8P22894 467 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 ACSL1P33121 698 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 RDXP35241 583 aaKnown RBP18.18■□□□□ 0.5
COL6A1-204ENST00000486023 SCNN1AP37088 669 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 DPP6P42658 865 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 LIMK1P53667 647 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 MTA1Q13330 715 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 C15orf59Q2T9L4 293 aaPredicted RBP18.18■□□□□ 0.5
COL6A1-204ENST00000486023 HNRNPA1L2Q32P51 320 aaKnown RBP18.18■□□□□ 0.5
COL6A1-204ENST00000486023 RAB6CQ53S08 254 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 SH3PXD2AQ5TCZ1 1133 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 DAB2IPQ5VWQ8 1189 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 ZNF776Q68DI1 518 aaPredicted RBP18.18■□□□□ 0.5
COL6A1-204ENST00000486023 LRRC31Q6UY01 552 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 TRIM72Q6ZMU5 477 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 TFAP2DQ7Z6R9 452 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 MMAAQ8IVH4 418 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms