RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 DOCK4Q8N1I0 1966 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 CER1O95813 267 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 ERBB2P04626 1255 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 TACR2P21452 398 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 ACSL1P33121 698 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 CLCN1P35523 988 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 MATKP42679 507 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 CTSOP43234 321 aaPredicted RBP21.58■■□□□ 1.05
LMBR1-217ENST00000485985 RPS14P62263 151 aaKnown RBP21.58■■□□□ 1.05
LMBR1-217ENST00000485985 HLA-BQ31612 363 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 PITRM1Q5JRX3 1037 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 OLFML1Q6UWY5 402 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 SLC47A2Q86VL8 602 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 CIR1Q86X95 450 aaPredicted RBP21.58■■□□□ 1.05
LMBR1-217ENST00000485985 PPP1R13BQ96KQ4 1090 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 BTN2A3PQ96KV6 586 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 NDST4Q9H3R1 872 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 C6orf106Q9H6K1 298 aaPredicted RBP21.58■■□□□ 1.05
LMBR1-217ENST00000485985 FAM204AQ9H8W3 233 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 FBRSQ9HAH7 460 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 PLCB1Q9NQ66 1216 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 KIAA1522Q9P206 1035 aaPredicted RBP21.58■■□□□ 1.05
LMBR1-217ENST00000485985 FNDC3AQ9Y2H6 1198 aaKnown RBP21.58■■□□□ 1.05
LMBR1-217ENST00000485985 GPSM3Q9Y4H4 160 aa21.58■■□□□ 1.05
LMBR1-217ENST00000485985 PTPRBP23467 1997 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 FOXN3O00409 490 aaPredicted RBP21.57■■□□□ 1.04
LMBR1-217ENST00000485985 GRAP2O75791 330 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 PTPN20Q4JDL3 420 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 DBX2Q6ZNG2 339 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 DEFB106AQ8N104 65 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 PRMT1Q99873 361 aaKnown RBP21.57■■□□□ 1.04
LMBR1-217ENST00000485985 TUBGCP2Q9BSJ2 902 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 NUP62CLQ9H1M0 184 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 PCED1AQ9H1Q7 454 aa21.57■■□□□ 1.04
LMBR1-217ENST00000485985 CCDC86Q9H6F5 360 aaKnown RBP21.57■■□□□ 1.04
LMBR1-217ENST00000485985 FREM2Q5SZK8 3169 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 SYNJ2BP-COX16A0A087WUM0 186 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 KCNU1A8MYU2 1149 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 HSF2BPO75031 334 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 ASLP04424 464 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 PRKCSHP14314 528 aaPredicted RBP21.56■■□□□ 1.04
LMBR1-217ENST00000485985 PTK2Q05397 1052 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 ACAP1Q15027 740 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 VWA3BQ502W6 1294 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 FAM114A1Q8IWE2 563 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 BAHD1Q8TBE0 780 aaPredicted RBP21.56■■□□□ 1.04
LMBR1-217ENST00000485985 RSPH9Q9H1X1 276 aaPredicted RBP21.56■■□□□ 1.04
LMBR1-217ENST00000485985 ASNSD1Q9NWL6 643 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 DDIT4Q9NX09 232 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 COX16Q9P0S2 106 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 FHOD1Q9Y613 1164 aa21.56■■□□□ 1.04
LMBR1-217ENST00000485985 NBEAQ8NFP9 2946 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 A0A1B0GVT2 93 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 SIN3BO75182 1162 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 DNTTP04053 509 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 GLI1P08151 1106 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ERCC5P28715 1186 aaPredicted RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 NUMBP49757 651 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ZBTB16Q05516 673 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 KCNMA1Q12791 1236 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 HNRNPA1L2Q32P51 320 aaKnown RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 EFHC1Q5JVL4 640 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 OTUD1Q5VV17 481 aaPredicted RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ZNF776Q68DI1 518 aaPredicted RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 C19orf48Q6RUI8 117 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 C11orf57Q6ZUT1 292 aaPredicted RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 DHX40Q8IX18 779 aaKnown RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 FAM71AQ8IYT1 594 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 APCDD1Q8J025 514 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ATP6V0D2Q8N8Y2 350 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 SNX19Q92543 992 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 SAMSN1Q9NSI8 373 aaKnown RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ERVW-1Q9UQF0 538 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.55■■□□□ 1.04
LMBR1-217ENST00000485985 PCDHGB2Q9Y5G2 931 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ACACAQ13085 2346 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 CABIN1Q9Y6J0 2220 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 ITIH6Q6UXX5 1313 aa21.55■■□□□ 1.04
LMBR1-217ENST00000485985 DOCK9Q9BZ29 2069 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 F5H5T6 163 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 DAB1O75553 588 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 CSNK1EP49674 416 aaKnown RBP21.54■■□□□ 1.04
LMBR1-217ENST00000485985 IRAK1P51617 712 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 AFF3P51826 1226 aaKnown RBP21.54■■□□□ 1.04
LMBR1-217ENST00000485985 ST8SIA6P61647 398 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 CDK17Q00537 523 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 CENPCQ03188 943 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 SMYD5Q6GMV2 418 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 OR6B2Q6IFH4 312 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 CCDC117Q8IWD4 279 aaPredicted RBP21.54■■□□□ 1.04
LMBR1-217ENST00000485985 RHBDD1Q8TEB9 315 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 TOR4AQ9NXH8 423 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 SERGEFQ9UGK8 458 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 SUN2Q9UH99 717 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 APC2O95996 2303 aa21.54■■□□□ 1.04
LMBR1-217ENST00000485985 TTC34A8MYJ7 566 aa21.53■■□□□ 1.04
LMBR1-217ENST00000485985 FLRT2O43155 660 aa21.53■■□□□ 1.04
LMBR1-217ENST00000485985 SEMA4FO95754 770 aa21.53■■□□□ 1.04
LMBR1-217ENST00000485985 ATXN1LP0C7T5 689 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms