RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 EDN1P05305 212 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 IRF1P10914 325 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 PDIA3P30101 505 aaKnown RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SLC6A4P31645 630 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 RXRGP48443 463 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 NXPH1P58417 271 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 ZBTB16Q05516 673 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 IFRD2Q12894 506 aaPredicted RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SPIDRQ14159 915 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SHBQ15464 509 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TGIF1Q15583 401 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 ZSCAN26Q16670 478 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 KYAT1Q16773 422 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SV2CQ496J9 727 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TDRD10Q5VZ19 366 aaKnown RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TAOK1Q7L7X3 1001 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 NEK8Q86SG6 692 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TMEM25Q86YD3 366 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 BBS7Q8IWZ6 715 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 MMP21Q8N119 569 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 FBXO39Q8N4B4 442 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 BOD1L1Q8NFC6 3051 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 OR4C6Q8NH72 309 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 WDR48Q8TAF3 677 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 BSNDQ8WZ55 320 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 GOLGA1Q92805 767 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 ARRDC3Q96B67 414 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 BICD1Q96G01 975 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SERAC1Q96JX3 654 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 ZNF560Q96MR9 790 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 FRMD6Q96NE9 622 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 PCNX1Q96RV3 2341 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TSPAN18Q96SJ8 248 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 DUSP23Q9BVJ7 150 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SLC29A3Q9BZD2 475 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 CIPCQ9C0C6 399 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 RASSF4Q9H2L5 321 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 FBRSQ9HAH7 460 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 BRMS1Q9HCU9 246 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SRA1Q9HD15 236 aaKnown RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 KCNMB3Q9NPA1 279 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 NCKIPSDQ9NZQ3 722 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TPX2Q9ULW0 747 aaKnown RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 PCDHGA7Q9Y5G6 932 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 ENTPD2Q9Y5L3 495 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 MRFAP1Q9Y605 127 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TAF6LQ9Y6J9 622 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 MYH10P35580 1976 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 WIPF3A6NGB9 483 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 PLD2O14939 933 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 ADAMTS3O15072 1205 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 SPTLC2O15270 562 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 PRPF3O43395 683 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 RNASEH1O60930 286 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 SASH3O75995 380 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 CNTN5O94779 1100 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 STK10O94804 968 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 ZNF202O95125 648 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 CLTAP09496 248 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 FDPSP14324 419 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 CASQ1P31415 396 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 TXLNAP40222 546 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 NOP2P46087 812 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 COPAP53621 1224 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 ZXDBP98169 803 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 MYL5Q02045 173 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 FGL2Q14314 439 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 PDIA5Q14554 519 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 SLC39A14Q15043 492 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 SLC10A6Q3KNW5 377 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 DPCR1Q3MIW9 517 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 SEZ6Q53EL9 994 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 FNDC3BQ53EP0 1204 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 WSCD1Q658N2 575 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 LRRTM3Q86VH5 581 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 TRIM22Q8IYM9 498 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 BLIDQ8IZY5 108 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 PDZD8Q8NEN9 1154 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 BHMTQ93088 406 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 FUBP3Q96I24 572 aaKnown RBP eCLIP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 CEP295NLQ96MC4 621 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 NAA15Q9BXJ9 866 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 SLC26A6Q9BXS9 759 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 EPB41L5Q9HCM4 733 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 KMT5AQ9NQR1 393 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 PRDM8Q9NQV8 689 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 SH3GLB2Q9NR46 395 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 DDX43Q9NXZ2 648 aaKnown RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 THAP10Q9P2Z0 257 aaPredicted RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 MAGEC2Q9UBF1 373 aaPredicted RBP6.62□□□□□ -1.35
CAPN13-206ENST00000485248 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 PCDHA12Q9UN75 941 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 L1RE1Q9UN81 338 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 USP3Q9Y6I4 520 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 F8P00451 2351 aa6.62□□□□□ -1.35
CAPN13-206ENST00000485248 BSNQ9UPA5 3926 aa6.61□□□□□ -1.35
CAPN13-206ENST00000485248 CPED1A4D0V7 1026 aa6.61□□□□□ -1.35
CAPN13-206ENST00000485248 ZNF840PA6NDX5 716 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms