RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 A0A1B0GVM2 712 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 TCAF2A6NFQ2 919 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 SLC30A4O14863 429 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 F9P00740 461 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 ASLP04424 464 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 ITPKAP23677 461 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 NUMBP49757 651 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 TPMTP51580 245 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 PTP4A2Q12974 167 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 CLEC16AQ2KHT3 1053 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 PLEKHG6Q3KR16 790 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 BRMS1LQ5PSV4 323 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 TTC39BQ5VTQ0 682 aaPredicted RBP13.31□□□□□ -0.28
HDAC1-209ENST00000484305 LYSMD4Q5XG99 296 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 TRIM72Q6ZMU5 477 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.28
HDAC1-209ENST00000484305 ERMP1Q7Z2K6 904 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 BNIPLQ7Z465 357 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 SLC41A1Q8IVJ1 513 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 EMC1Q8N766 993 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 OR2T3Q8NH03 318 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 PRCCQ92733 491 aaPredicted RBP13.31□□□□□ -0.28
HDAC1-209ENST00000484305 MRGPRX3Q96LB0 322 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 NAP1L5Q96NT1 182 aaPredicted RBP13.31□□□□□ -0.28
HDAC1-209ENST00000484305 RTKNQ9BST9 563 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 METTL5Q9NRN9 209 aaKnown RBP13.31□□□□□ -0.28
HDAC1-209ENST00000484305 ERVW-1Q9UQF0 538 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 SNX10Q9Y5X0 201 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 LAMA1P25391 3075 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 ATXN2Q99700 1313 aaKnown RBP13.31□□□□□ -0.28
HDAC1-209ENST00000484305 NYNRINQ9P2P1 1898 aaKnown RBP13.31□□□□□ -0.28
HDAC1-209ENST00000484305 CACNA1AO00555 2505 aa13.31□□□□□ -0.28
HDAC1-209ENST00000484305 LNP1A1A4G5 178 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 DCDC2BA2VCK2 349 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 NDUFS2O75306 463 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 MOCS3O95396 460 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 GJB6O95452 261 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 ACADMP11310 421 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 PDGFRAP16234 1089 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 MZF1P28698 734 aaPredicted RBP13.3□□□□□ -0.28
HDAC1-209ENST00000484305 CD6P30203 668 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 IRX4P78413 519 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 ZNF33AQ06730 810 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 MTA1Q13330 715 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 C5orf22Q49AR2 442 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 RAB6CQ53S08 254 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 CXorf57Q6NSI4 855 aaKnown RBP13.3□□□□□ -0.28
HDAC1-209ENST00000484305 ARCQ7LC44 396 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 SYT12Q8IV01 421 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 OR52K2Q8NGK3 314 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 JOSD2Q8TAC2 188 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 BAP1Q92560 729 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 TOE1Q96GM8 510 aaKnown RBP13.3□□□□□ -0.28
HDAC1-209ENST00000484305 RPL10LQ96L21 214 aaKnown RBP13.3□□□□□ -0.28
HDAC1-209ENST00000484305 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 RAB6CQ9H0N0 254 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 WSB2Q9NYS7 404 aaPredicted RBP13.3□□□□□ -0.28
HDAC1-209ENST00000484305 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 SLCO3A1Q9UIG8 710 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 PILRBQ9UKJ0 227 aa13.3□□□□□ -0.28
HDAC1-209ENST00000484305 A0A1B0GTH6 734 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 TTC34A8MYJ7 566 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 KHNYNO15037 678 aaKnown RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 CNTN5O94779 1100 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 IGLV3-19P01714 112 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 SRPRAP08240 638 aaKnown RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 C7P10643 843 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 FERP16591 822 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 NSFP46459 744 aaKnown RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 STK19P49842 368 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 PLK1P53350 603 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 LIMK1P53667 647 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 ST8SIA6P61647 398 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 ATP11AP98196 1134 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 ECT2LQ008S8 904 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 HNRNPA1L2Q32P51 320 aaKnown RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 FILIP1LQ4L180 1135 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 ARTNQ5T4W7 220 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 SH3PXD2AQ5TCZ1 1133 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 STPG1Q5TH74 334 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 PEAR1Q5VY43 1037 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 IRF2BP2Q7Z5L9 587 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 FAM131BQ86XD5 332 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 PHF13Q86YI8 300 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 ZNF683Q8IZ20 524 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 RXFP2Q8WXD0 754 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 HSPA12BQ96MM6 686 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 EDEM2Q9BV94 578 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 GPR174Q9BXC1 333 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 SEPT11Q9NVA2 429 aaKnown RBP13.29□□□□□ -0.28
HDAC1-209ENST00000484305 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 PAXBP1Q9Y5B6 917 aa13.29□□□□□ -0.28
HDAC1-209ENST00000484305 SPTBN2O15020 2390 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms