RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 SCNN1AP37088 669 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 PLK1P53350 603 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 PITX1P78337 314 aaPredicted RBP20.5■□□□□ 0.87
HPS4-213ENST00000483631 ECT2LQ008S8 904 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 PTPN20Q4JDL3 420 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 OR6B2Q6IFH4 312 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 FAM183BPQ6ZVS7 135 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 PASD1Q8IV76 773 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 PABPC3Q9H361 631 aaKnown RBP20.5■□□□□ 0.87
HPS4-213ENST00000483631 EIF2B4Q9UI10 523 aaKnown RBP20.5■□□□□ 0.87
HPS4-213ENST00000483631 AJAP1Q9UKB5 411 aaPredicted RBP20.5■□□□□ 0.87
HPS4-213ENST00000483631 NCKAP1Q9Y2A7 1128 aa20.5■□□□□ 0.87
HPS4-213ENST00000483631 CER1O95813 267 aa20.49■□□□□ 0.87
HPS4-213ENST00000483631 RDXP35241 583 aaKnown RBP20.49■□□□□ 0.87
HPS4-213ENST00000483631 AFF3P51826 1226 aaKnown RBP20.49■□□□□ 0.87
HPS4-213ENST00000483631 ST3GAL2Q16842 350 aa20.49■□□□□ 0.87
HPS4-213ENST00000483631 ACBD5Q5T8D3 534 aaPredicted RBP20.49■□□□□ 0.87
HPS4-213ENST00000483631 KLHDC7AQ5VTJ3 777 aa20.49■□□□□ 0.87
HPS4-213ENST00000483631 RNF219Q5W0B1 726 aaPredicted RBP20.49■□□□□ 0.87
HPS4-213ENST00000483631 FAM124AQ86V42 546 aa20.49■□□□□ 0.87
HPS4-213ENST00000483631 TMEM35BQ8NCS4 154 aa20.49■□□□□ 0.87
HPS4-213ENST00000483631 MIR1-1HGQ9H1L0 117 aa20.49■□□□□ 0.87
HPS4-213ENST00000483631 C6orf106Q9H6K1 298 aaPredicted RBP20.49■□□□□ 0.87
HPS4-213ENST00000483631 SYNCQ9H7C4 482 aa20.49■□□□□ 0.87
HPS4-213ENST00000483631 TPX2Q9ULW0 747 aaKnown RBP20.49■□□□□ 0.87
HPS4-213ENST00000483631 SIN3BO75182 1162 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 ERBB2P04626 1255 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 NNMTP40261 264 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 MATKP42679 507 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 GABRB2P47870 512 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 KCNMA1Q12791 1236 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 FOXC1Q12948 553 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 KCNJ12Q14500 433 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 DRAP1Q14919 205 aaPredicted RBP20.48■□□□□ 0.87
HPS4-213ENST00000483631 C5orf22Q49AR2 442 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 C9orf64Q5T6V5 341 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 MMS22LQ6ZRQ5 1243 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 CCAR2Q8N163 923 aaKnown RBP20.48■□□□□ 0.87
HPS4-213ENST00000483631 RNF34Q969K3 372 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 PGAP3Q96FM1 320 aaPredicted RBP20.48■□□□□ 0.87
HPS4-213ENST00000483631 NAA15Q9BXJ9 866 aaKnown RBP20.48■□□□□ 0.87
HPS4-213ENST00000483631 ADAMTS1Q9UHI8 967 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 FZD4Q9ULV1 537 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 STAP1Q9ULZ2 295 aa20.48■□□□□ 0.87
HPS4-213ENST00000483631 LSM8O95777 96 aaKnown RBP20.47■□□□□ 0.87
HPS4-213ENST00000483631 UCHL3P15374 230 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 CYP11B1P15538 503 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 CD27P26842 260 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 GRIA4P48058 902 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 SIM1P81133 766 aaPredicted RBP20.47■□□□□ 0.87
HPS4-213ENST00000483631 TEAD4Q15561 434 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 CST6Q15828 149 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 TCP11X2Q5H9J9 407 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 BRMS1LQ5PSV4 323 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 FBXL22Q6P050 247 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 OR2I1PQ8NGU4 316 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 ENOX1Q8TC92 643 aaKnown RBP20.47■□□□□ 0.87
HPS4-213ENST00000483631 NT5C3BQ969T7 300 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 PLCB1Q9NQ66 1216 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 DAAM1Q9Y4D1 1078 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 PAXBP1Q9Y5B6 917 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 PCDHGB2Q9Y5G2 931 aa20.47■□□□□ 0.87
HPS4-213ENST00000483631 GRAP2O75791 330 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 ADH1BP00325 375 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 F9P00740 461 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 ANP32AP39687 249 aaKnown RBP20.46■□□□□ 0.87
HPS4-213ENST00000483631 AUHQ13825 339 aaKnown RBP20.46■□□□□ 0.87
HPS4-213ENST00000483631 RAPGEF1Q13905 1077 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 ELAVL3Q14576 367 aaKnown RBP20.46■□□□□ 0.87
HPS4-213ENST00000483631 ZNF423Q2M1K9 1284 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 DHX40Q8IX18 779 aaKnown RBP20.46■□□□□ 0.87
HPS4-213ENST00000483631 APCDD1Q8J025 514 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 BIRC7Q96CA5 298 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 C18orf8Q96DM3 657 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 RPRD1AQ96P16 312 aaPredicted RBP20.46■□□□□ 0.87
HPS4-213ENST00000483631 NPY6RQ99463 290 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 STK33Q9BYT3 514 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 PDCL3Q9H2J4 239 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 SAMSN1Q9NSI8 373 aaKnown RBP20.46■□□□□ 0.87
HPS4-213ENST00000483631 LMBRD1Q9NUN5 540 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 FBXL12Q9NXK8 326 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 NEUROG3Q9Y4Z2 214 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 FHOD1Q9Y613 1164 aa20.46■□□□□ 0.87
HPS4-213ENST00000483631 TTC34A8MYJ7 566 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 M0QYT0 321 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 CLDN11O75508 207 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 PROS1P07225 676 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 PNMA6AP0CW24 399 aaPredicted RBP20.45■□□□□ 0.86
HPS4-213ENST00000483631 CTSOP43234 321 aaPredicted RBP20.45■□□□□ 0.86
HPS4-213ENST00000483631 CXorf57Q6NSI4 855 aaKnown RBP20.45■□□□□ 0.86
HPS4-213ENST00000483631 DBX2Q6ZNG2 339 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 ARCQ7LC44 396 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 NAXDQ8IW45 347 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 MSANTD4Q8NCY6 345 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 SNX19Q92543 992 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 PTPRN2Q92932 1015 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 FAM129BQ96TA1 746 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 ADAM33Q9BZ11 813 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 MTG2Q9H4K7 406 aa20.45■□□□□ 0.86
HPS4-213ENST00000483631 GAREM1Q9H706 876 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms