RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 C11orf74Q86VG3 221 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 CIR1Q86X95 450 aaPredicted RBP18.56■□□□□ 0.56
HDAC6-225ENST00000483506 KDM1BQ8NB78 822 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 FAM172AQ8WUF8 416 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 HMGB4Q8WW32 186 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 RUBCNQ92622 972 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 NTAN1Q96AB6 310 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 TRIM11Q96F44 468 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 MCEEQ96PE7 176 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 DNAJC7Q99615 494 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 RAB6CQ9H0N0 254 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 TMPRSS4Q9NRS4 437 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 PARVAQ9NVD7 372 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 PLA2G4CQ9UP65 541 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 TBC1D30Q9Y2I9 924 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 RAD54BQ9Y620 910 aa18.56■□□□□ 0.56
HDAC6-225ENST00000483506 ANKRD62A6NC57 917 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 TMCO5BA8MYB1 307 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 MYBL1P10243 752 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 ADRA1BP35368 520 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 P2RY2P41231 377 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 CSKP41240 450 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 SCAPQ12770 1279 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 STARD3Q14849 445 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 CDO1Q16878 200 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 ARL13BQ3SXY8 428 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 SERPINA13PQ6UXR4 307 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 PRR23BQ6ZRT6 265 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 CEP68Q76N32 757 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 VPS36Q86VN1 386 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 CYB5D2Q8WUJ1 264 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 MYO19Q96H55 970 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 CNPY3Q9BT09 278 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 TPSD1Q9BZJ3 242 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 OSBPL2Q9H1P3 480 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
HDAC6-225ENST00000483506 PPARGC1AQ9UBK2 798 aaKnown RBP18.55■□□□□ 0.56
HDAC6-225ENST00000483506 ADAMTS1Q9UHI8 967 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 RAB23Q9ULC3 237 aa18.55■□□□□ 0.56
HDAC6-225ENST00000483506 E9PAM4 449 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 CCP110O43303 1012 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 MOCS3O95396 460 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 PLEKP08567 350 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-225ENST00000483506 NDUFV2P19404 249 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 VASPP50552 380 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-225ENST00000483506 CAMK2GQ13555 558 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-225ENST00000483506 MAP7D1Q3KQU3 841 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 MANEALQ5VSG8 457 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 DCUN1D2Q6PH85 259 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 LRRC31Q6UY01 552 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 METTL3Q86U44 580 aaKnown RBP18.54■□□□□ 0.56
HDAC6-225ENST00000483506 FAM160A2Q8N612 972 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-225ENST00000483506 FNIP1Q8TF40 1166 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 ALG14Q96F25 216 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 LOXL4Q96JB6 756 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 MRGPRX3Q96LB0 322 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 MRGPRX1Q96LB2 322 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 RETREG1Q9H6L5 497 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 ARHGAP20Q9P2F6 1191 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 ZNF212Q9UDV6 495 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 NENFQ9UMX5 172 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 OR51B4Q9Y5P0 310 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 SNX10Q9Y5X0 201 aa18.54■□□□□ 0.56
HDAC6-225ENST00000483506 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 ATMINO43313 823 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 CNTN5O94779 1100 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 RETP07949 1114 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 SRPRAP08240 638 aaKnown RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 AIF1P55008 147 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 OGDHQ02218 1023 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 ZNF177Q13360 481 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 BYSLQ13895 437 aaKnown RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 PLK5Q496M5 336 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 FNDC3BQ53EP0 1204 aaKnown RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 ALFQ53S48 1182 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 SETD3Q86TU7 594 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 KBTBD6Q86V97 674 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 DNAAF5Q86Y56 855 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 APCDD1Q8J025 514 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 CCDC185Q8N715 623 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 OR52K2Q8NGK3 314 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 PPP1R9BQ96SB3 815 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 FBRSQ9HAH7 460 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 CNOT8Q9UFF9 292 aaKnown RBP18.53■□□□□ 0.56
HDAC6-225ENST00000483506 SCINQ9Y6U3 715 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 CFAP54Q96N23 3096 aa18.53■□□□□ 0.56
HDAC6-225ENST00000483506 A0A087X0T9 212 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 TMEM191CA6NGB0 347 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 ZBTB24O43167 697 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-225ENST00000483506 AP5Z1O43299 807 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 SYNCRIPO60506 623 aaKnown RBP18.52■□□□□ 0.56
HDAC6-225ENST00000483506 EPHX1P07099 455 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 FAM228BP0C875 321 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 MZF1P28698 734 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-225ENST00000483506 COPAP53621 1224 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 ECT2LQ008S8 904 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 SULT2A1Q06520 285 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-225ENST00000483506 OR8K1Q8NGG5 319 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms