RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 TRIM11Q96F44 468 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 GABRG3Q99928 467 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 CNPY3Q9BT09 278 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 TRIM7Q9C029 511 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 ABHD10Q9NUJ1 306 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 MPP6Q9NZW5 540 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 KIAA1522Q9P206 1035 aaPredicted RBP13.81□□□□□ -0.2
SSR1-208ENST00000483409 EBF1Q9UH73 591 aa13.81□□□□□ -0.2
SSR1-208ENST00000483409 INTS6Q9UL03 887 aaKnown RBP13.81□□□□□ -0.2
SSR1-208ENST00000483409 PRR23AA6NEV1 266 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 GFRA3O60609 400 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 RPP40O75818 363 aaKnown RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 LMNAP02545 664 aaKnown RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 ATP5BP06576 529 aaKnown RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 DLDP09622 509 aaKnown RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 MYBL1P10243 752 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 HLA-EP13747 358 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 PSMA2P25787 234 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 MZF1P28698 734 aaPredicted RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 ADRA1BP35368 520 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 CSKP41240 450 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 SIM2Q14190 667 aaPredicted RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 LPAL2Q16609 132 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 PTPRNQ16849 979 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 C5orf22Q49AR2 442 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 PITRM1Q5JRX3 1037 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 CCDC122Q5T0U0 273 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 SCYL2Q6P3W7 929 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 ALKBH5Q6P6C2 394 aaKnown RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 LRRC31Q6UY01 552 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 CEP68Q76N32 757 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 TFAP2DQ7Z6R9 452 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 RASSF3Q86WH2 238 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 APCDD1Q8J025 514 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 PGBD3Q8N328 593 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 ZNF366Q8N895 744 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 OR52K2Q8NGK3 314 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 C1orf74Q96LT6 269 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 THAP2Q9H0W7 228 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 EPC1Q9H2F5 836 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 SEMA4AQ9H3S1 761 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 ZNHIT6Q9NWK9 470 aaKnown RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 PLA2G4CQ9UP65 541 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
SSR1-208ENST00000483409 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 SCINQ9Y6U3 715 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 CHD5Q8TDI0 1954 aa13.8□□□□□ -0.2
SSR1-208ENST00000483409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 TMEM191CA6NGB0 347 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 AKR1B15C9JRZ8 316 aaPredicted RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 NPC1O15118 1278 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 CLDN11O75508 207 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 MOCS3O95396 460 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 EPHX1P07099 455 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 DESP17661 470 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 GABRG2P18507 467 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 CTSOP43234 321 aaPredicted RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 ZNF75DP51815 510 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 CDH4P55283 916 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 GFPT1Q06210 699 aaPredicted RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 ZNF252P-AS1Q0IIN9 211 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 TBX2Q13207 712 aaPredicted RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 ZNF177Q13360 481 aaPredicted RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 ENPP2Q13822 863 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 STARD3Q14849 445 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 ARID5BQ14865 1188 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 E2F5Q15329 346 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 PLEKHG6Q3KR16 790 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 ARTNQ5T4W7 220 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 ACBD5Q5T8D3 534 aaPredicted RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 CNGA4Q8IV77 575 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 DRC7Q8IY82 874 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 SUMF1Q8NBK3 374 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 GAB3Q8WWW8 586 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 NTAN1Q96AB6 310 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 TTC17Q96AE7 1141 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 CHP1Q99653 195 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 SLC6A17Q9H1V8 727 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 CD248Q9HCU0 757 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
SSR1-208ENST00000483409 OR12D3Q9UGF7 316 aa13.79□□□□□ -0.2
SSR1-208ENST00000483409 NUP205Q92621 2012 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 IGLV3-10A0A075B6K4 115 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 DRGXA6NNA5 263 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 FAM72CH0Y354 149 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 DCLK1O15075 740 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 ZBTB24O43167 697 aaPredicted RBP13.78□□□□□ -0.2
SSR1-208ENST00000483409 SYNCRIPO60506 623 aaKnown RBP13.78□□□□□ -0.2
SSR1-208ENST00000483409 ASLP04424 464 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 RHOCP08134 193 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 NDUFV2P19404 249 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 CNR2P34972 360 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
SSR1-208ENST00000483409 FAM72AQ5TYM5 149 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 FAM72DQ6L9T8 149 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 RWDD4Q6NW29 188 aaKnown RBP13.78□□□□□ -0.2
SSR1-208ENST00000483409 SLFN11Q7Z7L1 901 aa13.78□□□□□ -0.2
SSR1-208ENST00000483409 FAM72BQ86X60 149 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms