RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 DPYSQ14117 519 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 MTX3Q5HYI7 312 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 WDR78Q5VTH9 848 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF534Q76KX8 674 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 TAS1R3Q7RTX0 852 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 SETD3Q86TU7 594 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-205ENST00000483122 PGAM4Q8N0Y7 254 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 IL31RAQ8NI17 732 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 CIB1Q99828 191 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 SDCBP2Q9H190 292 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 TRPV6Q9H1D0 765 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 XPNPEP3Q9NQH7 507 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 ACSS2Q9NR19 701 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 PCDHA11Q9Y5I1 949 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 PCDHAC2Q9Y5I4 1007 aa12.09□□□□□ -0.47
VTI1A-205ENST00000483122 ARID2Q68CP9 1835 aa12.08□□□□□ -0.47
VTI1A-205ENST00000483122 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 BAIAP3O94812 1187 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 HSPA4LO95757 839 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 RBL1P28749 1068 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 GRIA1P42261 906 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 BMXP51813 675 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 CLDN10P78369 228 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 CBLBQ13191 982 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 MFSD4BQ5TF39 518 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 TMEM214Q6NUQ4 689 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 TMEM26Q6ZUK4 368 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 EBNA1BP2Q99848 306 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF341Q9BYN7 854 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 DUS2Q9NX74 493 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 AP4S1Q9Y587 144 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 PCDHB12Q9Y5F1 795 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 A0A087WXM4 84 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 H0YJX3 145 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 EXTL3O43909 919 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 KRT3P12035 628 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 GARTP22102 1010 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 MIPP30301 263 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 RPS3AP61247 264 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 PMS2P3Q13401 168 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 NR1D2Q14995 579 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 PTPN20Q4JDL3 420 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 SNRNP48Q6IEG0 339 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 APOBEC3HQ6NTF7 200 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF786Q8N393 782 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 CMASQ8NFW8 434 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 OR5B17Q8NGF7 314 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 RP9Q8TA86 221 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 TFAP2BQ92481 460 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 TMA16Q96EY4 203 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 MARK4Q96L34 752 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 NPLQ9BXD5 320 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 EIF2AQ9BY44 585 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 EHMT1Q9H9B1 1298 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 CXorf21Q9HAI6 301 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 NCKIPSDQ9NZQ3 722 aa12.08□□□□□ -0.48
VTI1A-205ENST00000483122 RBMX2Q9Y388 322 aaKnown RBP12.08□□□□□ -0.48
VTI1A-205ENST00000483122 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 TRIM64CA6NLI5 447 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 ZNF701M0R085 212 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 VAPBO95292 243 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 LYPLA2O95372 231 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 ERBB2P04626 1255 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 CKMT2P17540 419 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 RAB6CQ53S08 254 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 ZBTB41Q5SVQ8 909 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 TMEM198Q66K66 360 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 ANKRD26P1Q6NSI1 321 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 HMBOX1Q6NT76 420 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 SH3BP5LQ7L8J4 393 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 SLC15A4Q8N697 577 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 TDRD5Q8NAT2 981 aaKnown RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 PEBP4Q96S96 227 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 NPAS2Q99743 824 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 RAB6CQ9H0N0 254 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 PCDHAC1Q9H158 963 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 DCDC2Q9UHG0 476 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 SNX13Q9Y5W8 968 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 PSAT1Q9Y617 370 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 CDY2AQ9Y6F7 541 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 CDY1Q9Y6F8 540 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 CNOT3O75175 753 aaKnown RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 LSM8O95777 96 aaKnown RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 TRUB2O95900 331 aaKnown RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 GNAO1P09471 354 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 MCF2P10911 925 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 GRM5P41594 1212 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 MAGEA3P43357 314 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 CDH6P55285 790 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 CNTN2Q02246 1040 aa12.07□□□□□ -0.48
VTI1A-205ENST00000483122 LSM12Q3MHD2 195 aaKnown RBP12.07□□□□□ -0.48
VTI1A-205ENST00000483122 THOC7Q6I9Y2 204 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms