RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MRGPRX3Q96LB0 322 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 NAP1L5Q96NT1 182 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 FCRL3Q96P31 734 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 FAM129BQ96TA1 746 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 NRSN2Q9GZP1 204 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 CNGB3Q9NQW8 809 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 ADAMTS1Q9UHI8 967 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 USP25Q9UHP3 1055 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 SLCO3A1Q9UIG8 710 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 CFAP45Q9UL16 551 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 ERVW-1Q9UQF0 538 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 PTPRBP23467 1997 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 KNTC1P50748 2209 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 SETXQ7Z333 2677 aaKnown RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3DA0A087WVF3 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3IA0A087WXS9 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3EA0A087X179 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3KA0A087X1G2 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TARSL2A2RTX5 802 aaKnown RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3FA6NER0 549 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3LB9A6J9 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 O00370 1275 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 YKT6O15498 198 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 IRAK2O43187 625 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 STX10O60499 249 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 IGLV3-27P01718 113 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 ASLP04424 464 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3HP0C7X1 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 VDRP11473 427 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 GOT1P17174 413 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 CKMT2P17540 419 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 EPHA8P29322 1005 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 RXRGP48443 463 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 PSMD8P48556 350 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBX4P57082 545 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 NXPH1P58417 271 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 CUL2Q13617 745 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 CDH18Q13634 790 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 ARID5BQ14865 1188 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 ZCWPW2Q504Y3 356 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 SLC45A4Q5BKX6 768 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 PITRM1Q5JRX3 1037 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3GQ6DHY5 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3CQ6IPX1 549 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 PMF1Q6P1K2 205 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 SND1Q7KZF4 910 aaKnown RBP eCLIP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 GPR155Q7Z3F1 870 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 ZNF605Q86T29 641 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 SPATS2Q86XZ4 545 aaKnown RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 CCDC117Q8IWD4 279 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TBC1D3Q8IZP1 549 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 CFAP52Q8N1V2 620 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 SCML4Q8N228 414 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 STK40Q8N2I9 435 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 AADATQ8N5Z0 425 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 ZNF557Q8N988 423 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 HJURPQ8NCD3 748 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 SNIP1Q8TAD8 396 aaKnown RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 SLC35F5Q8WV83 523 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 TFAP2BQ92481 460 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 BAP1Q92560 729 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 AZIN2Q96A70 460 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 PRICKLE1Q96MT3 831 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 HELZ2Q9BYK8 2649 aaKnown RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 IRX2Q9BZI1 471 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 NUCKS1Q9H1E3 243 aaKnown RBP7.65□□□□□ -1.18
CSDE1-206ENST00000483030 ERVMER34-1Q9H9K5 563 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 KIAA1257Q9ULG3 409 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 FZD4Q9ULV1 537 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 CEP83Q9Y592 693 aa7.65□□□□□ -1.18
CSDE1-206ENST00000483030 EDDM13A0A1B0GTR0 161 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 TYW5A2RUC4 315 aaKnown RBP7.64□□□□□ -1.19
CSDE1-206ENST00000483030 C10orf142B7Z368 130 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 CAPN9O14815 690 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 CETN3O15182 167 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 BRINP1O60477 761 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 LUC7L3O95232 432 aaKnown RBP7.64□□□□□ -1.19
CSDE1-206ENST00000483030 MOCS3O95396 460 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 MOCS2O96007 188 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-206ENST00000483030 IL1BP01584 269 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 LTFP02788 710 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 SRPRAP08240 638 aaKnown RBP7.64□□□□□ -1.19
CSDE1-206ENST00000483030 SETSIPP0DME0 302 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 EPB41P11171 864 aaKnown RBP7.64□□□□□ -1.19
CSDE1-206ENST00000483030 PLA2G2AP14555 144 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 VAV1P15498 845 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 C5AR1P21730 350 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 GLDCP23378 1020 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 MAT2AP31153 395 aaKnown RBP7.64□□□□□ -1.19
CSDE1-206ENST00000483030 ACTN2P35609 894 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 SYKP43405 635 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 NUMBP49757 651 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 NDUFA8P51970 172 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 ADPRHP54922 357 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 YWHAEP62258 255 aaKnown RBP7.64□□□□□ -1.19
CSDE1-206ENST00000483030 PPP2CBP62714 309 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 PPP2CAP67775 309 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 ECT2LQ008S8 904 aa7.64□□□□□ -1.19
CSDE1-206ENST00000483030 TLE3Q04726 772 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms