RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TMEM216Q9P0N5 145 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 FZD10Q9ULW2 581 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 ENO4A6NNW6 628 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 ADAMTS4O75173 837 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 GNRH1P01148 92 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 PROCP04070 461 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 ERVK-10P10266 1014 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 SKIP12755 728 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 MLNP12872 115 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 CNTFP26441 200 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 MLH1P40692 756 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 PSEN2P49810 448 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 TRMT5Q32P41 509 aaKnown RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 RALGPS1Q5JS13 557 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 STXBP5Q5T5C0 1151 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 VWA5B1Q5TIE3 1220 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 C9orf57Q5W0N0 161 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 RSPH3Q86UC2 560 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 SLC2A14Q8TDB8 520 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 ZNF184Q99676 751 aaPredicted RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 GCOM2Q9BZD3 368 aaPredicted RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 FAM49AQ9H0Q0 323 aaPredicted RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 NXF3Q9H4D5 531 aaKnown RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 ZNF638Q14966 1978 aaKnown RBP15.25■□□□□ 0.03
ATG4B-220ENST00000482507 ZNF195O14628 629 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 MAP3K7O43318 606 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 ASGR1P07306 291 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 FDFT1P37268 417 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 DNAL1Q4LDG9 190 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 RNF220Q5VTB9 566 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 C1orf146Q5VVC0 180 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 UNC93AQ86WB7 457 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 DEFB106AQ8N104 65 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 ACMSDQ8TDX5 336 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 FCRL3Q96P31 734 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-220ENST00000482507 SEPT10Q9P0V9 454 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 SYNJ2BP-COX16A0A087WUM0 186 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 TREHO43280 583 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 SIN3BO75182 1162 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 GLRA3O75311 464 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 DESP17661 470 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 PGAM1P18669 254 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 AKAP5P24588 427 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 IDH3AP50213 366 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 BCAT1P54687 386 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 MXRA7P84157 204 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 CMC1Q7Z7K0 106 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 GATA6Q92908 595 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 IFT43Q96FT9 208 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 TTC1Q99614 292 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 GORASP1Q9BQQ3 440 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 OXCT2Q9BYC2 517 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-220ENST00000482507 SHCBP1LQ9BZQ2 653 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 C1orf21Q9H246 121 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 PIDD1Q9HB75 910 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 SPC25Q9HBM1 224 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 COX16Q9P0S2 106 aa15.25■□□□□ 0.03
ATG4B-220ENST00000482507 EME2A4GXA9 379 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-220ENST00000482507 SARNPP82979 210 aaKnown RBP15.24■□□□□ 0.03
ATG4B-220ENST00000482507 ARHGEF6Q15052 776 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 TBCCQ15814 346 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 FOXB2Q5VYV0 432 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 RNF111Q6ZNA4 994 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 WDR75Q8IWA0 830 aaKnown RBP15.24■□□□□ 0.03
ATG4B-220ENST00000482507 ZNF567Q8N184 647 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 CRYBG2Q8N1P7 616 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 LRRC52Q8N7C0 313 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 ADAMTS10Q9H324 1103 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 PLEKHA5Q9HAU0 1116 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 SOX13Q9UN79 622 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 DERAQ9Y315 318 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 ASB3Q9Y575 518 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 COL1A2P08123 1366 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 HACD1B0YJ81 288 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 CIB2O75838 187 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 SERPINE1P05121 402 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 GNL1P36915 607 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-220ENST00000482507 ARL4AP40617 200 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 MATKP42679 507 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 SULT1E1P49888 294 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 PEX6Q13608 980 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 DCAF4L1Q3SXM0 396 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 LHX8Q68G74 356 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 STRADAQ7RTN6 431 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 RASSF3Q86WH2 238 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 PLD6Q8N2A8 252 aaKnown RBP15.24■□□□□ 0.03
ATG4B-220ENST00000482507 PPFIBP2Q8ND30 876 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 SLAIN1Q8ND83 568 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 ZNF483Q8TF39 744 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-220ENST00000482507 RNF139Q8WU17 664 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 AZIN2Q96A70 460 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 PRDM12Q9H4Q4 367 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 GOLGA2P5Q9HBQ8 144 aa15.24■□□□□ 0.03
ATG4B-220ENST00000482507 HMX1Q9NP08 348 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-220ENST00000482507 HAS3O00219 553 aa15.23■□□□□ 0.03
ATG4B-220ENST00000482507 USP12O75317 370 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms