RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 PDGFRAP16234 1089 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 SPINK2P20155 84 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 SIM1P81133 766 aaPredicted RBP22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 ECT2LQ008S8 904 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 KCNMA1Q12791 1236 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 TAF3Q5VWG9 929 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 SMYD5Q6GMV2 418 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 SLC26A9Q7LBE3 791 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 CCAR2Q8N163 923 aaKnown RBP22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 TMEM35BQ8NCS4 154 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 RPL10LQ96L21 214 aaKnown RBP22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 RPRD1AQ96P16 312 aaPredicted RBP22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 PRMT1Q99873 361 aaKnown RBP22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 ZDHHC5Q9C0B5 715 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 PABPC3Q9H361 631 aaKnown RBP22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 TAB2Q9NYJ8 693 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 NCKAP1Q9Y2A7 1128 aa22.93■■□□□ 1.26
GPCPD1-206ENST00000481690 M0QYT0 321 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 FSBPO95073 299 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 CD59P13987 128 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 GGCXP38435 758 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 RNASE9P60153 205 aaKnown RBP22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 CENPCQ03188 943 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 TCP11X2Q5H9J9 407 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 KLHDC7AQ5VTJ3 777 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 TTC39BQ5VTQ0 682 aaPredicted RBP22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 DPY19L2P1Q6NXN4 242 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 KDM1BQ8NB78 822 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 LMBRD1Q9NUN5 540 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 SLCO3A1Q9UIG8 710 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 PLXNA2O75051 1894 aa22.92■■□□□ 1.26
GPCPD1-206ENST00000481690 EDDM13A0A1B0GTR0 161 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 A0A1B0GVM2 712 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 TCAF2A6NFQ2 919 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 FAM47DPA6NHR8 397 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 TOP3BO95985 862 aaKnown RBP22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 CYP11B1P15538 503 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 EEF1GP26641 437 aaKnown RBP22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 NOS2P35228 1153 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 STK19P49842 368 aaPredicted RBP22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 C9orf64Q5T6V5 341 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 FBXL22Q6P050 247 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 MMAAQ8IVH4 418 aaKnown RBP22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 SGK2Q9HBY8 427 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 FBXL12Q9NXK8 326 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 VANGL2Q9ULK5 521 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 SLCO1B1Q9Y6L6 691 aa22.91■■□□□ 1.26
GPCPD1-206ENST00000481690 ITIH6Q6UXX5 1313 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 A0A1B0GVT2 93 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 A0A1W2PP55 124 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 MID1O15344 667 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 SH3BP5O60239 455 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 GJB3O75712 270 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 CER1O95813 267 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 C7P10643 843 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 UCHL3P15374 230 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 MZF1P28698 734 aaPredicted RBP22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 NNMTP40261 264 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 MATKP42679 507 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 PSMD8P48556 350 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 SLC14A1Q13336 389 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 SLC12A1Q13621 1099 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 AUHQ13825 339 aaKnown RBP22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 CST6Q15828 149 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 ZDHHC17Q8IUH5 632 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 ZNF397Q8NF99 534 aaPredicted RBP22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 IGSF8Q969P0 613 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 BIRC7Q96CA5 298 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 CAMK1GQ96NX5 476 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 GAREM1Q9H706 876 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 IL21RQ9HBE5 538 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 SERGEFQ9UGK8 458 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 SCML1Q9UN30 329 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 HS3ST4Q9Y661 456 aa22.9■■□□□ 1.26
GPCPD1-206ENST00000481690 TARSL2A2RTX5 802 aaKnown RBP22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 RNASEH2AO75792 299 aaKnown RBP22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 CSNK1EP49674 416 aaKnown RBP22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 SULT1E1P49888 294 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 IRAK1P51617 712 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 AFF3P51826 1226 aaKnown RBP22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 FAM193AP78312 1265 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 ARID5BQ14865 1188 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 CT47A1Q5JQC4 288 aaPredicted RBP22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 FAM102AQ5T9C2 384 aaPredicted RBP22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 USP30Q70CQ3 517 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 NAXDQ8IW45 347 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 C1orf216Q8TAB5 229 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 OMDQ99983 421 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 SCNM1Q9BWG6 230 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 SIK2Q9H0K1 926 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 PIGVQ9NUD9 493 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 STAP1Q9ULZ2 295 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 PCDHB9Q9Y5E1 797 aa22.89■■□□□ 1.25
GPCPD1-206ENST00000481690 PAGE1O75459 146 aa22.88■■□□□ 1.25
GPCPD1-206ENST00000481690 TFE3P19532 575 aaPredicted RBP22.88■■□□□ 1.25
GPCPD1-206ENST00000481690 OXCT1P55809 520 aa22.88■■□□□ 1.25
GPCPD1-206ENST00000481690 BNC1Q01954 994 aa22.88■■□□□ 1.25
GPCPD1-206ENST00000481690 SULT2A1Q06520 285 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms