RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
LRRC47-203ENST00000479239 OGFRQ9NZT2 677 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 FNIP2Q9P278 1114 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 SEPT3Q9UH03 358 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 SLC12A6Q9UHW9 1150 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 TPX2Q9ULW0 747 aaKnown RBP6.32□□□□□ -1.4
LRRC47-203ENST00000479239 MAFFQ9ULX9 164 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 HPCAL4Q9UM19 191 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 MFHAS1Q9Y4C4 1052 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 YIPF1Q9Y548 306 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 GBF1Q92538 1859 aa6.32□□□□□ -1.4
LRRC47-203ENST00000479239 COL4A6Q14031 1691 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SLC12A8A0AV02 714 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 BCLAF3A2AJT9 711 aaKnown RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ANKRD33BA6NCL7 494 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ZNF840PA6NDX5 716 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 PRR33A8MZF0 331 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 HACD1B0YJ81 288 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 DNALI1O14645 258 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ZBTB24O43167 697 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TLR5O60602 858 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 PPFIA2O75334 1257 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 LRIG2O94898 1065 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 MOCS2O96007 188 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 APOEP02649 317 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CNPP09543 421 aaKnown RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ZDHHC11BP0C7U3 371 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SPATA31D3P0C874 917 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CSH1P0DML2 217 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CSH2P0DML3 217 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SRGAP2BP0DMP2 458 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 HMGA1P17096 107 aaKnown RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ERCC2P18074 760 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 RBL1P28749 1068 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 EPHB2P29323 1055 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 WEE1P30291 646 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CTNNB1P35222 781 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ACTN2P35609 894 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SCTRP47872 440 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 KPNA1P52294 538 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 GDF10P55107 478 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 FAM193AP78312 1265 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 FOXK2Q01167 660 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TWF1Q12792 350 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SLC10A2Q12908 348 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SEMA3BQ13214 749 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 PLD1Q13393 1074 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 EIF4EBP2Q13542 120 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SLMAPQ14BN4 828 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 PAFAH1B3Q15102 231 aaKnown RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 PDK1Q15118 436 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TRIP4Q15650 581 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SLC45A4Q5BKX6 768 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 HECTD3Q5T447 861 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 NCBP2-AS2Q69YL0 99 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 HIBCHQ6NVY1 386 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 RWDD4Q6NW29 188 aaKnown RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CEP128Q6ZU80 1094 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SPATA31D4Q6ZUB0 917 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TMC3Q7Z5M5 1100 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 DNAJB7Q7Z6W7 309 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 PCGF5Q86SE9 256 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CCDC25Q86WR0 208 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 MIB1Q86YT6 1006 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TAB3Q8N5C8 712 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CCDC33Q8N5R6 958 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CCNYQ8ND76 341 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 PDZD8Q8NEN9 1154 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TFB1MQ8WVM0 346 aaKnown RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 UBLCP1Q8WVY7 318 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 OVCA2Q8WZ82 227 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ZBTB9Q96C00 473 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 MRRFQ96E11 262 aaKnown RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 SLC39A13Q96H72 371 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 FCRL2Q96LA5 508 aaPredicted RBP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 KLHL5Q96PQ7 755 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 QKIQ96PU8 341 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TCF25Q9BQ70 676 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 FERMT1Q9BQL6 677 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 EMILIN2Q9BXX0 1053 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 FOXP3Q9BZS1 431 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 NACA2Q9H009 215 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ZBP1Q9H171 429 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 DTLQ9NZJ0 730 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TRPM5Q9NZQ8 1165 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 MARCH2Q9P0N8 246 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 TLR6Q9Y2C9 796 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 ATP8A1Q9Y2Q0 1164 aa6.31□□□□□ -1.4
LRRC47-203ENST00000479239 MICAL3Q7RTP6 2002 aa6.3□□□□□ -1.4
LRRC47-203ENST00000479239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.3□□□□□ -1.4
LRRC47-203ENST00000479239 LCHNA4D1U4 455 aa6.3□□□□□ -1.4
LRRC47-203ENST00000479239 ERVH48-1M5A8F1 160 aa6.3□□□□□ -1.4
LRRC47-203ENST00000479239 PPP1R12AO14974 1030 aaPredicted RBP6.3□□□□□ -1.4
LRRC47-203ENST00000479239 DCLK1O15075 740 aa6.3□□□□□ -1.4
LRRC47-203ENST00000479239 TP73O15350 636 aa6.3□□□□□ -1.4
LRRC47-203ENST00000479239 NCAM2O15394 837 aa6.3□□□□□ -1.4
LRRC47-203ENST00000479239 FGF10O15520 208 aaPredicted RBP6.3□□□□□ -1.4
LRRC47-203ENST00000479239 TGM5O43548 720 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms