RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 POPDC2Q9HBU9 364 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 NGRNQ9NPE2 291 aaKnown RBP6.93□□□□□ -1.3
USP48-208ENST00000479177 RAD18Q9NS91 495 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 COMMD8Q9NX08 183 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP48-208ENST00000479177 GMIPQ9P107 970 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 AP4E1Q9UPM8 1137 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 INSL5Q9Y5Q6 135 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 MRFAP1Q9Y605 127 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 ACTL7BQ9Y614 415 aa6.93□□□□□ -1.3
USP48-208ENST00000479177 PRRC2BQ5JSZ5 2229 aaKnown RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 ANAPC1Q9H1A4 1944 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 A0A1W2PQH9 124 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 CCDC66A2RUB6 948 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 EPOPA6NHQ4 379 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 KCNK3O14649 394 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 PRRG1O14668 218 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 GIPC1O14908 333 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 LPXNO60711 386 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 URI1O94763 535 aaPredicted RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 GLUD1P00367 558 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 C1RP00736 705 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 IGLV1-40P01703 118 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 ZDHHC11BP0C7U3 371 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 PRLRP16471 622 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 HMGA1P17096 107 aaKnown RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 TCP1P17987 556 aaKnown RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 YWHAQP27348 245 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 MAP4P27816 1152 aaKnown RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 MIPP30301 263 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 ELF1P32519 619 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 PCK1P35558 622 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 PGFP49763 221 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 SULT1E1P49888 294 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 PEX5P50542 639 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 CLCN4P51793 760 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 HDAC4P56524 1084 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 YWHAGP61981 247 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP48-208ENST00000479177 PITX1P78337 314 aaPredicted RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 TWF1Q12792 350 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 PLD1Q13393 1074 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 GPM6BQ13491 265 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 VEPH1Q14D04 833 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 SLC25A52Q3SY17 297 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 RAB6CQ53S08 254 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 LRRC38Q5VT99 294 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 CC2D1AQ6P1N0 951 aaPredicted RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 MSANTD2Q6P1R3 559 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 STRADAQ7RTN6 431 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 POLNQ7Z5Q5 900 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 TAC4Q86UU9 113 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 RHOT1Q8IXI2 618 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 SHISA5Q8N114 240 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 ARHGAP18Q8N392 663 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 UBL4BQ8N7F7 174 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 KREMEN2Q8NCW0 462 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 SLC7A14Q8TBB6 771 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 DQX1Q8TE96 717 aaKnown RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 GIPC2Q8TF65 315 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 COG1Q8WTW3 980 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 FBLIM1Q8WUP2 373 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 CENPIQ92674 756 aaPredicted RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 GOLGA1Q92805 767 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 TIFAQ96CG3 184 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 TRMT2BQ96GJ1 504 aaKnown RBP6.92□□□□□ -1.3
USP48-208ENST00000479177 PEBP4Q96S96 227 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 OSBPL9Q96SU4 736 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 TBCBQ99426 244 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 PSMB7Q99436 277 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 NPY6RQ99463 290 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 RAB6CQ9H0N0 254 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 LMAN2LQ9H0V9 348 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 CARD9Q9H257 536 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 SMOC2Q9H3U7 446 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 NMUR1Q9HB89 426 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 ZFYVE1Q9HBF4 777 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 CDC23Q9UJX2 597 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 STAP1Q9ULZ2 295 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 NAALADL1Q9UQQ1 740 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 SAR1BQ9Y6B6 198 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 AK5Q9Y6K8 562 aa6.92□□□□□ -1.3
USP48-208ENST00000479177 DENND4CQ5VZ89 1909 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 DOCK6Q96HP0 2047 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 CES2O00748 559 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 ZNF185O15231 689 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 SRGAP2O75044 1071 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 CLASP2O75122 1294 aaKnown RBP6.91□□□□□ -1.3
USP48-208ENST00000479177 TADA3O75528 432 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 RNF8O76064 485 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 ENDOD1O94919 500 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 IGLV3-25P01717 112 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 KRT1P04264 644 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 C8AP07357 584 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 SPATA31D3P0C874 917 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 CSH1P0DML2 217 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 CSH2P0DML3 217 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 NCAM1P13591 858 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 DESP17661 470 aa6.91□□□□□ -1.3
USP48-208ENST00000479177 RAB6AP20340 208 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms