RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 WDR47O94967 919 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 MAP4K4O95819 1239 aaPredicted RBP1.63□□□□□ -2.15
CALD1-218ENST00000478075 LCKP06239 509 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 VIL1P09327 827 aaKnown RBP1.63□□□□□ -2.15
CALD1-218ENST00000478075 MLLT10P55197 1068 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 POLE2P56282 527 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 LRMPQ12912 555 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 MTAPQ13126 283 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 EFHC1Q5JVL4 640 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 ARHGAP11AQ6P4F7 1023 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 C15orf39Q6ZRI6 1047 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 Q6ZSV7 163 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 CAMK1DQ8IU85 385 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 ANKRD44Q8N8A2 993 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 SPATA20Q8TB22 786 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 BICD2Q8TD16 824 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 SMCR8Q8TEV9 937 aaPredicted RBP1.63□□□□□ -2.15
CALD1-218ENST00000478075 RXFP3Q9NSD7 469 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 RNF146Q9NTX7 359 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 PAK5Q9P286 719 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 RGS17Q9UGC6 210 aaPredicted RBP1.63□□□□□ -2.15
CALD1-218ENST00000478075 VPS4AQ9UN37 437 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 SLC8A2Q9UPR5 921 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 ZHX2Q9Y6X8 837 aa1.63□□□□□ -2.15
CALD1-218ENST00000478075 GREB1LQ9C091 1923 aaPredicted RBP1.63□□□□□ -2.15
CALD1-218ENST00000478075 A0A088AWK7 358 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 MAGEA13PA6NCF6 341 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 CLGNO14967 610 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 NPR1P16066 1061 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 CHRNB2P17787 502 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 CNGA1P29973 690 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 HTR7P34969 479 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 STAT6P42226 847 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 NUDT6P53370 316 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 PMS2P54278 862 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 NSUN2Q08J23 767 aaKnown RBP eCLIP1.62□□□□□ -2.15
CALD1-218ENST00000478075 ACOX1Q15067 660 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 UGP2Q16851 508 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 KYAT3Q6YP21 454 aaKnown RBP1.62□□□□□ -2.15
CALD1-218ENST00000478075 EPHX4Q8IUS5 362 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 DENND1CQ8IV53 801 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 LAS2Q8IYD9 372 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 PAQR4Q8N4S7 273 aaPredicted RBP1.62□□□□□ -2.15
CALD1-218ENST00000478075 PLBD2Q8NHP8 589 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 MVB12AQ96EY5 273 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 BICD1Q96G01 975 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 SORBS1Q9BX66 1292 aaKnown RBP1.62□□□□□ -2.15
CALD1-218ENST00000478075 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.62□□□□□ -2.15
CALD1-218ENST00000478075 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 CROCCQ5TZA2 2017 aa1.62□□□□□ -2.15
CALD1-218ENST00000478075 KRTAP16-1A8MUX0 517 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 SOX30O94993 753 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 NFATC1O95644 943 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 GNLYP22749 145 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 NTSR1P30989 418 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 SLC8A1P32418 973 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 IGHMBP2P38935 993 aaKnown RBP1.61□□□□□ -2.15
CALD1-218ENST00000478075 ITGA8P53708 1063 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 RAB1AP62820 205 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 BNC1Q01954 994 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 STK3Q13188 491 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 HNF4GQ14541 408 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 FBXL16Q8N461 479 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 FSTL5Q8N475 847 aaPredicted RBP1.61□□□□□ -2.15
CALD1-218ENST00000478075 KDM1BQ8NB78 822 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 OR56A3Q8NH54 315 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 DEPTORQ8TB45 409 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 SECTM1Q8WVN6 248 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 SELENOOQ9BVL4 669 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 ARMT1Q9H993 441 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 PELI2Q9HAT8 420 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 PNRC2Q9NPJ4 139 aaKnown RBP1.61□□□□□ -2.15
CALD1-218ENST00000478075 DKK4Q9UBT3 224 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 TRHDEQ9UKU6 1024 aa1.61□□□□□ -2.15
CALD1-218ENST00000478075 IGLV5-37A0A075B6J1 123 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 KLLNB2CW77 178 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 WEE2P0C1S8 567 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 RFPL3SP0C7P2 107 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 EN2P19622 333 aaPredicted RBP1.6□□□□□ -2.15
CALD1-218ENST00000478075 MMP8P22894 467 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 AGTR2P50052 363 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 CPT1AP50416 773 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 PMPCAQ10713 525 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 EIF4EBP2Q13542 120 aaPredicted RBP1.6□□□□□ -2.15
CALD1-218ENST00000478075 SLC29A2Q14542 456 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 ENTPD8Q5MY95 495 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 RETSATQ6NUM9 610 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 OR52L2PQ8NGH6 319 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 MBD3L2Q8NHZ7 208 aaPredicted RBP1.6□□□□□ -2.15
CALD1-218ENST00000478075 SUN3Q8TAQ9 357 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 SORCS1Q8WY21 1168 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 CGRRF1Q99675 332 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 TUBA1CQ9BQE3 449 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.6□□□□□ -2.15
CALD1-218ENST00000478075 TRIM15Q9C019 465 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 UBTD1Q9HAC8 227 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 IL21RQ9HBE5 538 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 PCDHB2Q9Y5E7 798 aa1.6□□□□□ -2.15
CALD1-218ENST00000478075 A0A1W2PPL8 197 aa1.59□□□□□ -2.15
CALD1-218ENST00000478075 SAC3D1A6NKF1 404 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms