RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 COX16Q9P0S2 106 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 SLCO3A1Q9UIG8 710 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 SCML1Q9UN30 329 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 CEP83Q9Y592 693 aa11.15□□□□□ -0.62
SEC13-214ENST00000476597 PLXND1Q9Y4D7 1925 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 TTC34A8MYJ7 566 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 M0QYT0 321 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 PES1O00541 588 aaKnown RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 BCAT2O15382 392 aaPredicted RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 DAB1O75553 588 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 SCNN1AP37088 669 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 MATKP42679 507 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 CXCR3P49682 368 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 ZNF252P-AS1Q0IIN9 211 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 GRIK2Q13002 908 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 NME3Q13232 169 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 SLC14A1Q13336 389 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 C5orf22Q49AR2 442 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 RABGAP1LQ5R372 815 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 TTC39BQ5VTQ0 682 aaPredicted RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 OTUD1Q5VV17 481 aaPredicted RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 CDKAL1Q5VV42 579 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 ZNF776Q68DI1 518 aaPredicted RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 USP30Q70CQ3 517 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 C14orf80Q86SX3 495 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 ERICH1Q86X53 443 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 ZCCHC9Q8N567 271 aaKnown RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 OR2I1PQ8NGU4 316 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 PGAP3Q96FM1 320 aaPredicted RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 FAM129BQ96TA1 746 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 NPY6RQ99463 290 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 MIR1-1HGQ9H1L0 117 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 VPS16Q9H269 839 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 SGK2Q9HBY8 427 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 OSGEPQ9NPF4 335 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 ARHGEF38Q9NXL2 777 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 TAB2Q9NYJ8 693 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
SEC13-214ENST00000476597 EIF2B4Q9UI10 523 aaKnown RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 WASF3Q9UPY6 502 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.14□□□□□ -0.63
SEC13-214ENST00000476597 HS3ST4Q9Y661 456 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 NUP205Q92621 2012 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
SEC13-214ENST00000476597 AKAP13Q12802 2813 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 ITIH6Q6UXX5 1313 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 CACNA1EQ15878 2313 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 A0A1B0GVM2 712 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 TCAF2A6NFQ2 919 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 RNASEH1O60930 286 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 PAGE1O75459 146 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 SEMA4FO95754 770 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 F9P00740 461 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 PDGFRAP16234 1089 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 TFE3P19532 575 aaPredicted RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 MZF1P28698 734 aaPredicted RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 OXCT1P55809 520 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 RNASE9P60153 205 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 BNC1Q01954 994 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 SULT2A1Q06520 285 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 SFSWAPQ12872 951 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 KRT31Q15323 416 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 TTC31Q49AM3 519 aaPredicted RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 RNF219Q5W0B1 726 aaPredicted RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 CXorf57Q6NSI4 855 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 NOP9Q86U38 636 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 CIR1Q86X95 450 aaPredicted RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 XYLT1Q86Y38 959 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 DHX40Q8IX18 779 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 ALG14Q96F25 216 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 RPL10LQ96L21 214 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 RPRD1AQ96P16 312 aaPredicted RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 PPP1R9BQ96SB3 815 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 ADAM33Q9BZ11 813 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 GANQ9H2C0 597 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 PABPC3Q9H361 631 aaKnown RBP11.13□□□□□ -0.63
SEC13-214ENST00000476597 WDCPQ9H6R7 721 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 ANLNQ9NQW6 1124 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 PIGVQ9NUD9 493 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 FBXL12Q9NXK8 326 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 NCKAP1Q9Y2A7 1128 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
SEC13-214ENST00000476597 ASCC3Q8N3C0 2202 aaKnown RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 MAP1BP46821 2468 aaKnown RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 CHD6Q8TD26 2715 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 EDDM13A0A1B0GTR0 161 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 LRRC10BA6NIK2 292 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 DRGXA6NNA5 263 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 F8VZ95 297 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 I6L893 689 aaPredicted RBP11.12□□□□□ -0.63
SEC13-214ENST00000476597 CLDN11O75508 207 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 ADCY5O95622 1261 aa11.12□□□□□ -0.63
SEC13-214ENST00000476597 LSM8O95777 96 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms