RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MTG2Q9H4K7 406 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 PI4KAP42356 2102 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 A0A1B0GVM2 712 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 TCAF2A6NFQ2 919 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 F9P00740 461 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 MZF1P28698 734 aaPredicted RBP21.83■■□□□ 1.09
LIME1-204ENST00000476183 NSFP46459 744 aaKnown RBP21.83■■□□□ 1.09
LIME1-204ENST00000476183 MTA1Q13330 715 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 PUM1Q14671 1186 aaKnown RBP eCLIP21.83■■□□□ 1.09
LIME1-204ENST00000476183 C5orf22Q49AR2 442 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 FILIP1LQ4L180 1135 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 AASDHQ4L235 1098 aaPredicted RBP21.83■■□□□ 1.09
LIME1-204ENST00000476183 SPDYCQ5MJ68 293 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 TTC39BQ5VTQ0 682 aaPredicted RBP21.83■■□□□ 1.09
LIME1-204ENST00000476183 CXorf57Q6NSI4 855 aaKnown RBP21.83■■□□□ 1.09
LIME1-204ENST00000476183 SLC36A4Q6YBV0 504 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 IRF2BP2Q7Z5L9 587 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 PHF13Q86YI8 300 aaPredicted RBP21.83■■□□□ 1.09
LIME1-204ENST00000476183 ZNF683Q8IZ20 524 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 OR2T3Q8NH03 318 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 PIGKQ92643 395 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 PRSS16Q9NQE7 514 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 ITM2CQ9NQX7 267 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 TMEM74BQ9NUR3 256 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 ADAM22Q9P0K1 906 aa21.83■■□□□ 1.09
LIME1-204ENST00000476183 CDV3Q9UKY7 258 aaKnown RBP21.83■■□□□ 1.09
LIME1-204ENST00000476183 NUMA1Q14980 2115 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 A0A1W2PQC6 194 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 PATE3B3GLJ2 98 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 AP5Z1O43299 807 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 FOXD2O60548 495 aaPredicted RBP21.82■■□□□ 1.08
LIME1-204ENST00000476183 ASLP04424 464 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 PDGFRAP16234 1089 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 FERP16591 822 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 NR1I3Q14994 352 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 ARTNQ5T4W7 220 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 LYSMD4Q5XG99 296 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 SND1Q7KZF4 910 aaKnown RBP eCLIP21.82■■□□□ 1.08
LIME1-204ENST00000476183 SLC41A1Q8IVJ1 513 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 C12orf50Q8NA57 414 aaPredicted RBP21.82■■□□□ 1.08
LIME1-204ENST00000476183 OR52K2Q8NGK3 314 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 NETO1Q8TDF5 533 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 RXFP2Q8WXD0 754 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 PRCCQ92733 491 aaPredicted RBP21.82■■□□□ 1.08
LIME1-204ENST00000476183 SYT11Q9BT88 431 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 SEPT11Q9NVA2 429 aaKnown RBP21.82■■□□□ 1.08
LIME1-204ENST00000476183 MYO6Q9UM54 1294 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 ERVW-1Q9UQF0 538 aa21.82■■□□□ 1.08
LIME1-204ENST00000476183 ATXN2Q99700 1313 aaKnown RBP21.81■■□□□ 1.08
LIME1-204ENST00000476183 CNTN5O94779 1100 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 ENDOD1O94919 500 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 C7P10643 843 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 PTMSP20962 102 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 ITPKAP23677 461 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 RDXP35241 583 aaKnown RBP21.81■■□□□ 1.08
LIME1-204ENST00000476183 TPMTP51580 245 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 GSCP56915 257 aaPredicted RBP21.81■■□□□ 1.08
LIME1-204ENST00000476183 ATP11AP98196 1134 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 C15orf59Q2T9L4 293 aaPredicted RBP21.81■■□□□ 1.08
LIME1-204ENST00000476183 ZSCAN23Q3MJ62 389 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 CCDC14Q49A88 953 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 SH3PXD2AQ5TCZ1 1133 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 E4F1Q66K89 784 aaPredicted RBP21.81■■□□□ 1.08
LIME1-204ENST00000476183 MON1BQ7L1V2 547 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 FAM131BQ86XD5 332 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 WSB2Q9NYS7 404 aaPredicted RBP21.81■■□□□ 1.08
LIME1-204ENST00000476183 SLCO3A1Q9UIG8 710 aa21.81■■□□□ 1.08
LIME1-204ENST00000476183 CNOT1A5YKK6 2376 aaKnown RBP21.81■■□□□ 1.08
LIME1-204ENST00000476183 C2CD4BA6NLJ0 364 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 LRRC53A6NM62 1247 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 MOCS3O95396 460 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 SERPINC1P01008 464 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 CD6P30203 668 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 PLK1P53350 603 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 ECT2LQ008S8 904 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 ZNF33AQ06730 810 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 SLC12A1Q13621 1099 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 ALFQ53S48 1182 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 SYT12Q8IV01 421 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 ALG14Q96F25 216 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 TOE1Q96GM8 510 aaKnown RBP21.8■■□□□ 1.08
LIME1-204ENST00000476183 TTYH3Q9C0H2 523 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 SUN2Q9UH99 717 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 PILRBQ9UKJ0 227 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 PAXBP1Q9Y5B6 917 aa21.8■■□□□ 1.08
LIME1-204ENST00000476183 TCRBV5S1A1TA0A578 114 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 TTC34A8MYJ7 566 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 SLC30A4O14863 429 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 SIN3BO75182 1162 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 CLDN11O75508 207 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 IGLV3-19P01714 112 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 CALB1P05937 261 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 SRPRAP08240 638 aaKnown RBP21.79■■□□□ 1.08
LIME1-204ENST00000476183 SDHBP21912 280 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 STK19P49842 368 aaPredicted RBP21.79■■□□□ 1.08
LIME1-204ENST00000476183 ST8SIA6P61647 398 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 RPS14P62263 151 aaKnown RBP21.79■■□□□ 1.08
LIME1-204ENST00000476183 FANCCQ00597 558 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 CDO1Q16878 200 aa21.79■■□□□ 1.08
LIME1-204ENST00000476183 HNRNPA1L2Q32P51 320 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms