RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ALG1Q9BT22 464 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 DSCC1Q9BVC3 393 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 HERC2P3Q9BVR0 1158 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 OSBPL8Q9BZF1 889 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 S100A14Q9HCY8 104 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 PRDM5Q9NQX1 630 aaPredicted RBP5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 CYP26B1Q9NR63 512 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 FARSBQ9NSD9 589 aaKnown RBP5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 TMOD2Q9NZR1 351 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 IP6K2Q9UHH9 426 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 DBR1Q9UK59 544 aaKnown RBP5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 AGO2Q9UKV8 859 aaKnown RBP5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 SF3B6Q9Y3B4 125 aaKnown RBP5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 RWDD3Q9Y3V2 267 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 RPTORQ8N122 1335 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 STK36Q9NRP7 1315 aa5.28□□□□□ -1.56
TMEM39A-206ENST00000473684 TEX51A0A1B0GUA7 166 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 GOLGA8JA6NMD2 632 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 KLRF2D3W0D1 207 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 NMT2O60551 498 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 KPNA6O60684 536 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 JRKO75564 520 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TM7SF2O76062 418 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PRAMEF1O95521 474 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 GSTM1P09488 218 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM87AP0C7U9 286 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 RBP3P10745 1247 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 FOXN2P32314 431 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PIK3CAP42336 1068 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 KIR3DL1P43629 444 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CASP5P51878 434 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SRP54P61011 504 aaKnown RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 OLR1P78380 273 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PRKCQQ04759 706 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CYP4F3Q08477 520 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CD300CQ08708 224 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SMARCB1Q12824 385 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SELENBP1Q13228 472 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 NTRK3Q16288 839 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 DGKDQ16760 1214 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 MCMDC2Q4G0Z9 681 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TMC5Q6UXY8 1006 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 C22orf34Q6ZV56 151 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 AACSQ86V21 672 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 NLRP10Q86W26 655 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 JAMLQ86YT9 394 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TMEM126BQ8IUX1 230 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CATSPER1Q8NEC5 780 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 GDPD5Q8WTR4 605 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 ZFPM2Q8WW38 1151 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CAPSLQ8WWF8 208 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 KCTD13Q8WZ19 329 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 ANKS1AQ92625 1134 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 C1orf159Q96HA4 380 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TTC25Q96NG3 672 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SSBP4Q9BWG4 385 aaPredicted RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 HOXD1Q9GZZ0 328 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 HIPK3Q9H422 1215 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SMARCAD1Q9H4L7 1026 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF277Q9NRM2 450 aaPredicted RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 LGALS13Q9UHV8 139 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 MAPRE3Q9UPY8 281 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PCDHGA8Q9Y5G5 932 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM83GA6ND36 823 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM47DPA6NHR8 397 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PLSCR1O15162 318 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 DHX15O43143 795 aaKnown RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A9O60656 530 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PRLP01236 227 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PLEKP08567 350 aaPredicted RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A6P19224 532 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A1P22309 533 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A4P22310 534 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 IL13P35225 146 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A3P35503 534 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A5P35504 534 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC1A4P43007 532 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 AFMP43652 599 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 MTIF2P46199 727 aaKnown RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CENPAP49450 140 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PTENP60484 403 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 GABREP78334 506 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SQLEQ14534 574 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PDK4Q16654 411 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PLEKHG6Q3KR16 790 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SFRP5Q5T4F7 317 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 OGFOD2Q6N063 350 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF600Q6ZNG1 722 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 KCTD20Q7Z5Y7 419 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 KRT77Q7Z794 578 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 MTDHQ86UE4 582 aaKnown RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 GPR180Q86V85 440 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 LRRTM3Q86VH5 581 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SNX32Q86XE0 403 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CLEC10AQ8IUN9 316 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 AFAP1L2Q8N4X5 818 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TMEM145Q8NBT3 493 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 OR10Z1Q8NGY1 313 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms