RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 PCDHGA12O60330 932 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 RNASEH1O60930 286 aaKnown RBP10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 RFPL3O75679 317 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 C1QL1O75973 258 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 LTFP02788 710 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 FYNP06241 537 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 PDGFRAP16234 1089 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 MZF1P28698 734 aaPredicted RBP10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 CD38P28907 300 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 GTF2H1P32780 548 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 RACK1P63244 317 aaKnown RBP10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 CDH18Q13634 790 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 NFIL3Q16649 462 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 HNRNPA1L2Q32P51 320 aaKnown RBP10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 ACCSLQ4AC99 568 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 ZC3H12AQ5D1E8 599 aaKnown RBP10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 SYPL2Q5VXT5 272 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 DENND1BQ6P3S1 775 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 KDM7AQ6ZMT4 941 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 TAC4Q86UU9 113 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 CHSY1Q86X52 802 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 ARHGEF19Q8IW93 802 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 SCUBE3Q8IX30 993 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 SAP25Q8TEE9 199 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 TMEM174Q8WUU8 243 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 SLC39A7Q92504 469 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 TTC17Q96AE7 1141 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 FAM149B1Q96BN6 582 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 PCED1AQ9H1Q7 454 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
SCAMP3-205ENST00000472397 GCN1Q92616 2671 aaKnown RBP10.46□□□□□ -0.74
SCAMP3-205ENST00000472397 A0A087WV48 116 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 LRRC72A6NJI9 287 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 FFAR2O15552 330 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 ZNF202O95125 648 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 LUC7L3O95232 432 aaKnown RBP10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 IGLV3-27P01718 113 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 PRLRP16471 622 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 ACADVLP49748 655 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 ADPRHP54922 357 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 NUCB2P80303 420 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 ZBTB16Q05516 673 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 TAF5Q15542 800 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 PKDCCQ504Y2 493 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 MS4A13Q5J8X5 152 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 RNF219Q5W0B1 726 aaPredicted RBP10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 MSANTD2Q6P1R3 559 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 LCLAT1Q6UWP7 414 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 TMC6Q7Z403 805 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 TMPRSS12Q86WS5 348 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 PPM1KQ8N3J5 372 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 UBR7Q8N806 425 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 HJURPQ8NCD3 748 aaPredicted RBP10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 ENGASEQ8NFI3 743 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 OR2T34Q8NGX1 318 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 FIBINQ8TAL6 211 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 SLC35F5Q8WV83 523 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 KCTD13Q8WZ19 329 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 GOLGA1Q92805 767 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 SNX21Q969T3 373 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 FCRL3Q96P31 734 aaPredicted RBP10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 OSBPL2Q9H1P3 480 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 OSGEPQ9NPF4 335 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 FZD3Q9NPG1 666 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 ACP6Q9NPH0 428 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 CNGB3Q9NQW8 809 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 GDF3Q9NR23 364 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 TJP2Q9UDY2 1190 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 STOML2Q9UJZ1 356 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 SARDHQ9UL12 918 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 TP53BP1Q12888 1972 aaPredicted RBP10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 SHROOM3Q8TF72 1996 aa10.45□□□□□ -0.74
SCAMP3-205ENST00000472397 TLR4O00206 839 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 RNF103O00237 685 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 TRIM38O00635 465 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 BRINP1O60477 761 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 STX10O60499 249 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 SETSIPP0DME0 302 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 KRT5P13647 590 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 TACR2P21452 398 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 EPHA8P29322 1005 aaPredicted RBP10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 IRAK1P51617 712 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 NXPH1P58417 271 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 CXADRP78310 365 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 KRT85P78386 507 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 ECT2LQ008S8 904 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 CENPCQ03188 943 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 C19orf57Q0VDD7 668 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 E2F5Q15329 346 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 INAVAQ3KP66 663 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 C6orf118Q5T5N4 469 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 NUGGCQ68CJ6 796 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 KLHL10Q6JEL2 608 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 LRRC69Q6ZNQ3 347 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 SND1Q7KZF4 910 aaKnown RBP eCLIP10.44□□□□□ -0.745e-10■■□□□ 14
SCAMP3-205ENST00000472397 CCDC117Q8IWD4 279 aaPredicted RBP10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 UNC45BQ8IWX7 931 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms