RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TDRD6O60522 2096 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 A0A1W2PPC4 97 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 A0A1W2PQ27 194 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 A0A1W2PQ64 194 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 TTLL8A6PVC2 850 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 TCP11X1B4DZS4 312 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CLIC2O15247 247 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 ACTN4O43707 911 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 LZTS3O60299 673 aaPredicted RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 RPN1P04843 607 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 EPHX1P07099 455 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 ITGA2BP08514 1039 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 GIMD1P0DJR0 217 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 LIPCP11150 499 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 TRIM21P19474 475 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 TGM2P21980 687 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 FECHP22830 423 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 BDNFP23560 247 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 RXRGP48443 463 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 NDUFA8P51970 172 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 HDAC4P56524 1084 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 NXPH1P58417 271 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 TNNC1P63316 161 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 RBP5P82980 135 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 DAB2P98082 770 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 MYL7Q01449 175 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 POU5F1Q01860 360 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 ZNF211Q13398 564 aaPredicted RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 TRPC3Q13507 836 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 SNRNP35Q16560 246 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 KNOP1Q1ED39 458 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 CEP135Q66GS9 1140 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 KIAA0895LQ68EN5 471 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 FAM171BQ6P995 826 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 DENND5BQ6ZUT9 1274 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 Q71RC1 249 aaPredicted RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 DDX42Q86XP3 938 aaKnown RBP eCLIP6.13□□□□□ -1.43
VARS-222ENST00000470953 CBWD2Q8IUF1 395 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CSGALNACT2Q8N6G5 542 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 TEX19Q8NA77 164 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 XXYLT1Q8NBI6 393 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 RDH13Q8NBN7 331 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CCDC127Q96BQ5 260 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 PAGE5Q96GU1 130 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 C5orf34Q96MH7 638 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 XPO6Q96QU8 1125 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 BTBD1Q9H0C5 482 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 RUBCNLQ9H714 662 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CCSER2Q9H7U1 834 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 PDE11AQ9HCR9 933 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CRTAC1Q9NQ79 661 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 PRDM8Q9NQV8 689 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 AASDHPPTQ9NRN7 309 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 AGPAT3Q9NRZ7 376 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CGNQ9P2M7 1197 aaKnown RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 SERGEFQ9UGK8 458 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CHORDC1Q9UHD1 332 aaPredicted RBP6.13□□□□□ -1.43
VARS-222ENST00000470953 FBXO10Q9UK96 956 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 CLEC4EQ9ULY5 219 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 AGAP1Q9UPQ3 857 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 SLC5A6Q9Y289 635 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 FRMD4BQ9Y2L6 1034 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 STYXL1Q9Y6J8 313 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 PTPRJQ12913 1337 aa6.13□□□□□ -1.43
VARS-222ENST00000470953 HEATR9A2RTY3 570 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 C10orf142B7Z368 130 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 TLR4O00206 839 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 FFAR2O15552 330 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 KCNAB3O43448 404 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 CALUO43852 315 aaPredicted RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 PRICKLE3O43900 615 aaPredicted RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 SMC2O95347 1197 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 TBX18O95935 607 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 LMO2P25791 158 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 CD38P28907 300 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 PCSK1P29120 753 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 CSTF2P33240 577 aaKnown RBP eCLIP6.12□□□□□ -1.43
VARS-222ENST00000470953 MLLT3P42568 568 aaPredicted RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 MAGEA11P43364 429 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 ARRB1P49407 418 aaPredicted RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 GALCP54803 685 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 MFAP3P55082 362 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 CDH8P55286 799 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 WNT7BP56706 349 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 PSMC1P62191 440 aaKnown RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 RPS14P62263 151 aaKnown RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 SNRPFP62306 86 aaKnown RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 IFRD2Q12894 506 aaPredicted RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 DUOXA2Q1HG44 320 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 KMT5BQ4FZB7 885 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 KRBA2Q6ZNG9 492 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 JAMLQ86YT9 394 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 WDR49Q8IV35 697 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 LRRC52Q8N7C0 313 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 CCDC150Q8NCX0 1101 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 OR2T3Q8NH03 318 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 WDR36Q8NI36 951 aaKnown RBP6.12□□□□□ -1.43
VARS-222ENST00000470953 MYLPFQ96A32 169 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 ARRDC3Q96B67 414 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 HPDLQ96IR7 371 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms