RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 COPAP53621 1224 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 ATXN1P54253 815 aaKnown RBP16.19■□□□□ 0.18
HDAC6-218ENST00000470942 ATP11AP98196 1134 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 CENPCQ03188 943 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 ZNF177Q13360 481 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-218ENST00000470942 CAMK2GQ13555 558 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-218ENST00000470942 SLC12A1Q13621 1099 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 PLEKHG6Q3KR16 790 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 SPDYCQ5MJ68 293 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 RNF219Q5W0B1 726 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-218ENST00000470942 LYSMD4Q5XG99 296 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 TCEAL6Q6IPX3 200 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 TRNP1Q6NT89 227 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 ARCQ7LC44 396 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 METTL3Q86U44 580 aaKnown RBP16.19■□□□□ 0.18
HDAC6-218ENST00000470942 LUZP1Q86V48 1076 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 APCDD1Q8J025 514 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 NETO1Q8TDF5 533 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 TCEAL3Q969E4 200 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 ITM2CQ9NQX7 267 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 TMEM51Q9NW97 253 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 ERVW-1Q9UQF0 538 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 SNX10Q9Y5X0 201 aa16.19■□□□□ 0.18
HDAC6-218ENST00000470942 PI4KAP42356 2102 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 GJB6O95452 261 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 CALB1P05937 261 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 SRPRAP08240 638 aaKnown RBP16.18■□□□□ 0.18
HDAC6-218ENST00000470942 TNFAIP3P21580 790 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 SDC4P31431 198 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
HDAC6-218ENST00000470942 CTSOP43234 321 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-218ENST00000470942 IRAK1P51617 712 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 ECT2LQ008S8 904 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 CDO1Q16878 200 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 SKOR2Q2VWA4 1001 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-218ENST00000470942 LRRC31Q6UY01 552 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 PHF13Q86YI8 300 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-218ENST00000470942 JOSD2Q8TAC2 188 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 RXFP2Q8WXD0 754 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 BAP1Q92560 729 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 PPP1R9BQ96SB3 815 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 SELENOOQ9BVL4 669 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 MTG2Q9H4K7 406 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 PRSS16Q9NQE7 514 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 ANLNQ9NQW6 1124 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 TMPRSS4Q9NRS4 437 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 DLL3Q9NYJ7 618 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 MYO6Q9UM54 1294 aa16.18■□□□□ 0.18
HDAC6-218ENST00000470942 ATXN2Q99700 1313 aaKnown RBP16.18■□□□□ 0.18
HDAC6-218ENST00000470942 A0A1W2PQC6 194 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 LRRC53A6NM62 1247 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 KHNYNO15037 678 aaKnown RBP16.17■□□□□ 0.18
HDAC6-218ENST00000470942 CLDN11O75508 207 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 KRT3P12035 628 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 ITPKAP23677 461 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 MZF1P28698 734 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-218ENST00000470942 CD6P30203 668 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 OXTRP30559 389 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 TPMTP51580 245 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 CDH4P55283 916 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 OXCT1P55809 520 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 FANCCQ00597 558 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 ZNF33AQ06730 810 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 PTP4A2Q12974 167 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 NR1I3Q14994 352 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 ASIC2Q16515 512 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 C15orf59Q2T9L4 293 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-218ENST00000470942 ZSCAN23Q3MJ62 389 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 DGLUCYQ7Z3D6 616 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 IRF2BP2Q7Z5L9 587 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 FAM131BQ86XD5 332 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 SYT12Q8IV01 421 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 TOE1Q96GM8 510 aaKnown RBP16.17■□□□□ 0.18
HDAC6-218ENST00000470942 MYO19Q96H55 970 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 RPL10LQ96L21 214 aaKnown RBP16.17■□□□□ 0.18
HDAC6-218ENST00000470942 MRGPRX3Q96LB0 322 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 RTKNQ9BST9 563 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 FBRSQ9HAH7 460 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 RXFP3Q9NSD7 469 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 USP36Q9P275 1121 aaKnown RBP16.17■□□□□ 0.18
HDAC6-218ENST00000470942 DOCK4Q8N1I0 1966 aa16.17■□□□□ 0.18
HDAC6-218ENST00000470942 TTC34A8MYJ7 566 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 PATE3B3GLJ2 98 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 I6L893 689 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-218ENST00000470942 SRGAP2O75044 1071 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 CNTN5O94779 1100 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 NNMTP40261 264 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 DPP6P42658 865 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 SULT2A1Q06520 285 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 HNRNPA1L2Q32P51 320 aaKnown RBP16.16■□□□□ 0.18
HDAC6-218ENST00000470942 CCDC14Q49A88 953 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 C5orf22Q49AR2 442 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 SFMBT2Q5VUG0 894 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 CXorf57Q6NSI4 855 aaKnown RBP16.16■□□□□ 0.18
HDAC6-218ENST00000470942 FAM124AQ86V42 546 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 RGL4Q8IZJ4 473 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 KDM1BQ8NB78 822 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 C1orf74Q96LT6 269 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 HSPA12BQ96MM6 686 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms