RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 CACNA1AO00555 2505 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 COL4A3Q01955 1670 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 KRBA1A5PL33 1030 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 PI15O43692 258 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 TULP3O75386 442 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 CNTN5O94779 1100 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 LUC7L3O95232 432 aaKnown RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 FTCDO95954 541 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 EPHB2P29323 1055 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 ARL4AP40617 200 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 DGKGP49619 791 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 GALK1P51570 392 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 ZNF177Q13360 481 aaPredicted RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 GAB4Q2WGN9 574 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 ALFQ53S48 1182 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 TTC39BQ5VTQ0 682 aaPredicted RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 CWF19L1Q69YN2 538 aaKnown RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 GRAMD4Q6IC98 578 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 ZNF662Q6ZS27 426 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 PSTKQ8IV42 348 aaKnown RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 CCAR2Q8N163 923 aaKnown RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 CD101Q93033 1021 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 EXOC4Q96A65 974 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 P2RY11Q96G91 374 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 SHDQ96IW2 340 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 PNKPQ96T60 521 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 P2RY13Q9BPV8 354 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 CALN1Q9BXU9 219 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 IRX2Q9BZI1 471 aaPredicted RBP14.05□□□□□ -0.16
LMNA-210ENST00000469565 ZYG11BQ9C0D3 744 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 CLEC4EQ9ULY5 219 aa14.05□□□□□ -0.16
LMNA-210ENST00000469565 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.05□□□□□ -0.16
LMNA-210ENST00000469565 KIAA1549LQ6ZVL6 1849 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 A0A1B0GVM2 712 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 LRRD1A4D1F6 860 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 TCAF2A6NFQ2 919 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 DRGXA6NNA5 263 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 H3BRJ5 948 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 GFRA2O00451 464 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 MAN2B1O00754 1011 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 TRIM24O15164 1050 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 CACNG3O60359 315 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 PENKP01210 267 aaPredicted RBP14.04□□□□□ -0.16
LMNA-210ENST00000469565 LMNAP02545 664 aaKnown RBP14.04□□□□□ -0.16
LMNA-210ENST00000469565 KRT1P04264 644 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 APODP05090 189 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 GLULP15104 373 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 GOT1P17174 413 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 OPRD1P41143 372 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 NUMBP49757 651 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 DNA2P51530 1060 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 CDH4P55283 916 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 NRG1Q02297 640 aaPredicted RBP14.04□□□□□ -0.16
LMNA-210ENST00000469565 PRKCQQ04759 706 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 MMRN1Q13201 1228 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 MPP7Q5T2T1 576 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 TXNDC11Q6PKC3 985 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 ZNF852Q6ZMS4 543 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 ZNF683Q8IZ20 524 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 LRRC57Q8N9N7 239 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 DTWD2Q8NBA8 298 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 WFDC5Q8TCV5 224 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 CATSPERBQ9H7T0 1116 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 PCDH18Q9HCL0 1135 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 ARHGEF4Q9NR80 690 aa14.04□□□□□ -0.16
LMNA-210ENST00000469565 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
LMNA-210ENST00000469565 PPARGC1AQ9UBK2 798 aaKnown RBP14.04□□□□□ -0.16
LMNA-210ENST00000469565 PACSIN2Q9UNF0 486 aaPredicted RBP14.04□□□□□ -0.16
LMNA-210ENST00000469565 IGLV3-10A0A075B6K4 115 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 TBC1D3BA6NDS4 549 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 USP27XA6NNY8 438 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.03□□□□□ -0.16
LMNA-210ENST00000469565 PSTPIP1O43586 416 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 CLDN11O75508 207 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 CD48P09326 243 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 AMPD1P23109 780 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 OR1E1P30953 314 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 GRSF1Q12849 480 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMNA-210ENST00000469565 PUM1Q14671 1186 aaKnown RBP eCLIP14.03□□□□□ -0.164e-11■□□□□ 9
LMNA-210ENST00000469565 UBXN2BQ14CS0 331 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 PDK2Q15119 407 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 DPYSL2Q16555 572 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 C5orf22Q49AR2 442 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 PREPLQ4J6C6 727 aaPredicted RBP14.03□□□□□ -0.16
LMNA-210ENST00000469565 MANEALQ5VSG8 457 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 LRRC38Q5VT99 294 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 NUDT18Q6ZVK8 323 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 CHST9Q7L1S5 443 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 POLNQ7Z5Q5 900 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 MAP7D3Q8IWC1 876 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 ETFBKMTQ8IXQ9 262 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 KIAA2013Q8IYS2 634 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 RAPGEF5Q92565 580 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
LMNA-210ENST00000469565 MSANTD3Q96H12 275 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 SLC2A11Q9BYW1 496 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 ABCB8Q9NUT2 735 aa14.03□□□□□ -0.16
LMNA-210ENST00000469565 CWC15Q9P013 229 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms