RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 DEFB103AP81534 67 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 PRPSAP1Q14558 356 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 TMED2Q15363 201 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 TAF12Q16514 161 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 SKIDA1Q1XH10 827 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ANO4Q32M45 955 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 UBAP2Q5T6F2 1119 aaKnown RBP9.59□□□□□ -0.87
SMC1A-205ENST00000469129 FAXCQ5TGI0 409 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 RSPO2Q6UXX9 243 aaPredicted RBP9.59□□□□□ -0.87
SMC1A-205ENST00000469129 B4GALNT4Q76KP1 1039 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ZNF567Q8N184 647 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 NPWQ8N729 165 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 RTL3Q8N8U3 475 aaKnown RBP9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ZNF461Q8TAF7 563 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ARHGEF2Q92974 986 aaKnown RBP9.59□□□□□ -0.87
SMC1A-205ENST00000469129 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 TRMT2BQ96GJ1 504 aaKnown RBP9.59□□□□□ -0.87
SMC1A-205ENST00000469129 TSGA13Q96PP4 275 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 YME1L1Q96TA2 773 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 NAT9Q9BTE0 207 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 ZYG11BQ9C0D3 744 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 SIK2Q9H0K1 926 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 GBA3Q9H227 469 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 OSER1Q9NX31 292 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 RSPH14Q9UHP6 348 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 NEU3Q9UQ49 428 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 SLC27A5Q9Y2P5 690 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 YIPF1Q9Y548 306 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 PCDHB12Q9Y5F1 795 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 HS3ST4Q9Y661 456 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 MRPL42Q9Y6G3 142 aaKnown RBP9.59□□□□□ -0.87
SMC1A-205ENST00000469129 TEX264Q9Y6I9 313 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 IKBKGQ9Y6K9 419 aa9.59□□□□□ -0.87
SMC1A-205ENST00000469129 GBF1Q92538 1859 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 TRIM43BA6NCK2 446 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 TLR5O60602 858 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 SOAT2O75908 522 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 NEBLO76041 1014 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 ABLIM3O94929 683 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 METTL18O95568 372 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 RHOQP17081 205 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 PTPN3P26045 913 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 PSMB4P28070 264 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 ELF1P32519 619 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 ATP5C1P36542 298 aaKnown RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 NDST2P52849 883 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 NRLP54845 237 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 MLLT6P55198 1093 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 GPX6P59796 221 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 IFI35P80217 286 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 GAD2Q05329 585 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 DMTNQ08495 405 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 WASHC5Q12768 1159 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 NAB1Q13506 487 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 RAB33AQ14088 237 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 MSS51Q4VC12 460 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 SNX30Q5VWJ9 437 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 LRRC8BQ6P9F7 803 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 PSRC1Q6PGN9 363 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 KLHDC10Q6PID8 442 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 TAS1R1Q7RTX1 841 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 PID1Q7Z2X4 250 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 ITIH5Q86UX2 942 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 FATE1Q969F0 183 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 TRIM43Q96BQ3 446 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 CENPTQ96BT3 561 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 VWCEQ96DN2 955 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 CFAP36Q96G28 342 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 VN1R3Q9BXE9 311 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 NACA2Q9H009 215 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 CRISPLD1Q9H336 500 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 MRPL17Q9NRX2 175 aaKnown RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 HAUS2Q9NVX0 235 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 TMEM248Q9NWD8 314 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 EURLQ9NYK6 297 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 TRPM5Q9NZQ8 1165 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 ZC3H7BQ9UGR2 993 aaKnown RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 DNMT3LQ9UJW3 386 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 MAGED2Q9UNF1 606 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-205ENST00000469129 NR2E3Q9Y5X4 410 aa9.58□□□□□ -0.88
SMC1A-205ENST00000469129 IGLV3-10A0A075B6K4 115 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 IQANK1A0A1B0GTG1 560 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 SLC12A8A0AV02 714 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 ARHGAP42A6NI28 874 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 RASA4BC9J798 803 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 POC1B-GALNT4F8VUJ3 575 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 DFFAO00273 331 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 C2CD2LO14523 706 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 PRRG1O14668 218 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 TRDMT1O14717 391 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 RASA4O43374 803 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 BANF1O75531 89 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 SUN1O94901 812 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 AP2A1O95782 977 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 INHBAP08476 426 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 RPL17P18621 184 aaKnown RBP9.57□□□□□ -0.88
SMC1A-205ENST00000469129 KRT15P19012 456 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 SSTR1P30872 391 aa9.57□□□□□ -0.88
SMC1A-205ENST00000469129 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms