RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CST6Q15828 149 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 DCAF6Q58WW2 860 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 SYPL2Q5VXT5 272 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 NCEH1Q6PIU2 408 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 TMPRSS7Q7RTY8 843 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 TAC4Q86UU9 113 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 MMAAQ8IVH4 418 aaKnown RBP17.87■□□□□ 0.45
TRIM56-203ENST00000467847 LGI2Q8N0V4 545 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 KDM1BQ8NB78 822 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 MDM1Q8TC05 714 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 KREMEN1Q96MU8 473 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 ACE2Q9BYF1 805 aaPredicted RBP17.87■□□□□ 0.45
TRIM56-203ENST00000467847 CTNND2Q9UQB3 1225 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 ERVW-1Q9UQF0 538 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 A0A1W2PP55 124 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 LRRC72A6NJI9 287 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 TTC34A8MYJ7 566 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 PPP1R3GB7ZBB8 358 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 TNFSF14O43557 240 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 DKK1O94907 266 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 ZIC2O95409 532 aaPredicted RBP17.86■□□□□ 0.45
TRIM56-203ENST00000467847 SRPRAP08240 638 aaKnown RBP17.86■□□□□ 0.45
TRIM56-203ENST00000467847 GALCP54803 685 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 RACK1P63244 317 aaKnown RBP17.86■□□□□ 0.45
TRIM56-203ENST00000467847 NUCB2P80303 420 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 ECT2LQ008S8 904 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 IL9RQ01113 521 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 KCNH2Q12809 1159 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 INAVAQ3KP66 663 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 C9orf64Q5T6V5 341 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 RNF219Q5W0B1 726 aaPredicted RBP17.86■□□□□ 0.45
TRIM56-203ENST00000467847 DENND1BQ6P3S1 775 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 SLC6A18Q96N87 628 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 OMDQ99983 421 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 INTS2Q9H0H0 1204 aaKnown RBP17.86■□□□□ 0.45
TRIM56-203ENST00000467847 NEUROG2Q9H2A3 272 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 TJP2Q9UDY2 1190 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 XPO7Q9UIA9 1087 aaKnown RBP17.86■□□□□ 0.45
TRIM56-203ENST00000467847 CNTN6Q9UQ52 1028 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 IGSF10Q6WRI0 2623 aa17.86■□□□□ 0.45
TRIM56-203ENST00000467847 EDDM13A0A1B0GTR0 161 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 A0A1W2PPC4 97 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 TARSL2A2RTX5 802 aaKnown RBP17.85■□□□□ 0.45
TRIM56-203ENST00000467847 VILLO15195 856 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 MED7O43513 233 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 DFNA5O60443 496 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 GNA14O95837 355 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 AFPP02771 609 aaKnown RBP17.85■□□□□ 0.45
TRIM56-203ENST00000467847 BMP6P22004 513 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 CCDC157Q569K6 752 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 ZC3H12AQ5D1E8 599 aaKnown RBP17.85■□□□□ 0.45
TRIM56-203ENST00000467847 RAP1GAP2Q684P5 730 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 FOXR2Q6PJQ5 311 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 BEND5Q7L4P6 421 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 CHSY1Q86X52 802 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 TRIM59Q8IWR1 403 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 ELOA2Q8IYF1 753 aaPredicted RBP17.85■□□□□ 0.45
TRIM56-203ENST00000467847 GALNT15Q8N3T1 639 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 OR2T34Q8NGX1 318 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 STK32AQ8WU08 396 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 BTN2A3PQ96KV6 586 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 SLC4A5Q9BY07 1137 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 POPDC2Q9HBU9 364 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 ADAMTS1Q9UHI8 967 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 FZD4Q9ULV1 537 aa17.85■□□□□ 0.45
TRIM56-203ENST00000467847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRIM56-203ENST00000467847 ITIH6Q6UXX5 1313 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 E5RJQ4 531 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 PAPSS1O43252 624 aaPredicted RBP17.84■□□□□ 0.45
TRIM56-203ENST00000467847 LETM1O95202 739 aaPredicted RBP17.84■□□□□ 0.45
TRIM56-203ENST00000467847 TACR2P21452 398 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 SLC8A1P32418 973 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 PSMD8P48556 350 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 MEA1Q16626 185 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 MARCH9Q86YJ5 346 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 APCDD1Q8J025 514 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 HNRNPLLQ8WVV9 542 aaKnown RBP17.84■□□□□ 0.45
TRIM56-203ENST00000467847 SKA1Q96BD8 255 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 RPL10LQ96L21 214 aaKnown RBP17.84■□□□□ 0.45
TRIM56-203ENST00000467847 MED15Q96RN5 788 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 UBE2TQ9NPD8 197 aaPredicted RBP17.84■□□□□ 0.45
TRIM56-203ENST00000467847 AASDHPPTQ9NRN7 309 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 FTSJ1Q9UET6 329 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 SLCO3A1Q9UIG8 710 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 LOC400499M0QZD8 3231 aa17.84■□□□□ 0.45
TRIM56-203ENST00000467847 F5H5T6 163 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 BIN1O00499 593 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 THAP12O43422 761 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 TRUB2O95900 331 aaKnown RBP17.83■□□□□ 0.44
TRIM56-203ENST00000467847 ADH1BP00325 375 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 MARSP56192 900 aaKnown RBP17.83■□□□□ 0.44
TRIM56-203ENST00000467847 STX17P56962 302 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 YWHAZP63104 245 aaKnown RBP17.83■□□□□ 0.44
TRIM56-203ENST00000467847 PAK1Q13153 545 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 MORC3Q14149 939 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 SND1Q7KZF4 910 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRIM56-203ENST00000467847 TMEM110Q86TL2 294 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 STK40Q8N2I9 435 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 AADATQ8N5Z0 425 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 ZNF606Q8WXB4 792 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms