RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SGF29Q96ES7 293 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 APOPT1Q96IL0 206 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 HPDLQ96IR7 371 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 BCO2Q9BYV7 579 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 LIN28AQ9H9Z2 209 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 PCDHGB4Q9UN71 923 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 POMPQ9Y244 141 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 PCDHGB5Q9Y5G0 923 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 DNAJC25-GNG10A0A024R161 153 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 E5RJQ4 531 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 XPOTO43592 962 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 CILPO75339 1184 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 TFPTP0C1Z6 253 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 GPD2P43304 727 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 NDST1P52848 882 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 HADHQ16836 314 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 PPP1R2P3Q6NXS1 205 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 ILDR2Q71H61 639 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 AMIGO2Q86SJ2 522 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 ARID3BQ8IVW6 561 aaPredicted RBP18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 TSPAN14Q8NG11 270 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 CXorf38Q8TB03 319 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 SHKBP1Q8TBC3 707 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 SPATA18Q8TC71 538 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 ACTRT2Q8TDY3 377 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 AFG1LQ8WV93 481 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 STARD8Q92502 1023 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 ADPGKQ9BRR6 497 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 DHRS4Q9BTZ2 278 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 MAGEB5Q9BZ81 275 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 PDZD7Q9H5P4 517 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 PCDH9Q9HC56 1237 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 CDH22Q9UJ99 828 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 PPME1Q9Y570 386 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 HCRTO43612 131 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 TRPA1O75762 1119 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 ARPC4P59998 168 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 EIF3EP60228 445 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 AMHR2Q16671 573 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 HSF5Q4G112 596 aaPredicted RBP18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 OR6B2Q6IFH4 312 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 IGDCC3Q8IVU1 814 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 FBXO36Q8NEA4 188 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 NLRP7Q8WX94 980 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 PAIP1Q9H074 479 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 LHX5Q9H2C1 402 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 ERAP1Q9NZ08 941 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 CNTN3Q9P232 1028 aa18.5■□□□□ 0.55
SNAPC3-205ENST00000467062 MED7O43513 233 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 CNOT3O75175 753 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 ALDH3B2P48448 385 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 AQP5P55064 265 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 TAP1Q03518 808 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 ANKDD1AQ495B1 522 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 ARMCX2Q7L311 632 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 EME1Q96AY2 570 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 CCDC124Q96CT7 223 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 LRGUKQ96M69 825 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 FAM49BQ9NUQ9 324 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 SLC38A7Q9NVC3 462 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 FARP1Q9Y4F1 1045 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 BRCA1P38398 1863 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 PPEF2O14830 753 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 ESRRBO95718 433 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 SLC25A27O95847 323 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 LGALS2P05162 132 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 KRT7P08729 469 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 CYP2C9P11712 490 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 ADCYAP1R1P41586 468 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 CDH6P55285 790 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 TTLL4Q14679 1199 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 FAXCQ5TGI0 409 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 CENPSQ8N2Z9 138 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 ACAP3Q96P50 834 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 TPK1Q9H3S4 243 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 ADARB2Q9NS39 739 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 TRNAU1APQ9NX07 287 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 HES2Q9Y543 173 aa18.49■□□□□ 0.55
SNAPC3-205ENST00000467062 PAPPA2Q9BXP8 1791 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 MYOCOSA0A1B0GUC4 107 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 FUCA1P04066 466 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 EIF2S1P05198 315 aaKnown RBP18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 PDGFRAP16234 1089 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 PRDX6P30041 224 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 COPAP53621 1224 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 C21orf59P57076 290 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 RALGPS1Q5JS13 557 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 BBS12Q6ZW61 710 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 POLNQ7Z5Q5 900 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 RXFP2Q8WXD0 754 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 USP6NLQ92738 828 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 XPO7Q9UIA9 1087 aaKnown RBP18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 TSPAN16Q9UKR8 245 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 GNEQ9Y223 722 aaKnown RBP18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 IQANK1A0A1B0GTG1 560 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 GAS2O43903 313 aaKnown RBP18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 KLHL2O95198 593 aa18.48■□□□□ 0.55
SNAPC3-205ENST00000467062 TRUB2O95900 331 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms