RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 SLC25A13Q9UJS0 675 aa18.1■□□□□ 0.49
COL7A1-206ENST00000466591 TPRP12270 2363 aaKnown RBP18.1■□□□□ 0.49
COL7A1-206ENST00000466591 CKAP5Q14008 2032 aa18.1■□□□□ 0.49
COL7A1-206ENST00000466591 A0A1W2PP55 124 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 TARSL2A2RTX5 802 aaKnown RBP18.09■□□□□ 0.49
COL7A1-206ENST00000466591 IL1BP01584 269 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 TPM2P07951 284 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 PDGFRAP16234 1089 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 SULT2A1Q06520 285 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 SLC12A1Q13621 1099 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 TAF5Q15542 800 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 CST6Q15828 149 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 VWA3BQ502W6 1294 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 FAM183BPQ6ZVS7 135 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 USP30Q70CQ3 517 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 CCAR2Q8N163 923 aaKnown RBP18.09■□□□□ 0.49
COL7A1-206ENST00000466591 BIRC7Q96CA5 298 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 RPL10LQ96L21 214 aaKnown RBP18.09■□□□□ 0.49
COL7A1-206ENST00000466591 CPXM1Q96SM3 734 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 CLSTN2Q9H4D0 955 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 STAP1Q9ULZ2 295 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 NEUROG3Q9Y4Z2 214 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 PAXBP1Q9Y5B6 917 aa18.09■□□□□ 0.49
COL7A1-206ENST00000466591 PCDH15Q96QU1 1955 aa18.08■□□□□ 0.49
COL7A1-206ENST00000466591 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-206ENST00000466591 A0A1B0GVM2 712 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 TMEM8BA6NDV4 472 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 TCAF2A6NFQ2 919 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 BECN2A8MW95 431 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 TTC34A8MYJ7 566 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 M0QYT0 321 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 MID1O15344 667 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 ZNF18P17022 549 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 CD27P26842 260 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 SLC8A1P32418 973 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 CTSOP43234 321 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-206ENST00000466591 RNASE9P60153 205 aaKnown RBP18.08■□□□□ 0.48
COL7A1-206ENST00000466591 ZNF177Q13360 481 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-206ENST00000466591 INAVAQ3KP66 663 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 KIAA0895LQ68EN5 471 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 DSG4Q86SJ6 1040 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 CIR1Q86X95 450 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-206ENST00000466591 CHCHD4Q8N4Q1 142 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 KDM1BQ8NB78 822 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 RHBDD1Q8TEB9 315 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 MYEOVQ96EZ4 313 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 TUBGCP2Q9BSJ2 902 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 ACE2Q9BYF1 805 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-206ENST00000466591 SIK2Q9H0K1 926 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 NDST4Q9H3R1 872 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 IL21RQ9HBE5 538 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 TM9SF3Q9HD45 589 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 AASDHPPTQ9NRN7 309 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 ASNSD1Q9NWL6 643 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 VANGL2Q9ULK5 521 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 PCDHGC3Q9UN70 934 aa18.08■□□□□ 0.48
COL7A1-206ENST00000466591 GOLGA8CPA6NN73 597 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 FLRT2O43155 660 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 BNIP3LO60238 219 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 ADH1BP00325 375 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
COL7A1-206ENST00000466591 GRIA4P48058 902 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 FAM193AP78312 1265 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 SLC47A2Q86VL8 602 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 ZDHHC17Q8IUH5 632 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 APCDD1Q8J025 514 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 TMEM35BQ8NCS4 154 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 OR14C36Q8NHC7 312 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 ZCCHC14Q8WYQ9 949 aaKnown RBP18.07■□□□□ 0.48
COL7A1-206ENST00000466591 MUC3BQ9H195 1237 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 PLCB1Q9NQ66 1216 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 VPS28Q9UK41 221 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 KLK13Q9UKR3 277 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 INTS6Q9UL03 887 aaKnown RBP18.07■□□□□ 0.48
COL7A1-206ENST00000466591 ANKRD6Q9Y2G4 727 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 FNDC3AQ9Y2H6 1198 aaKnown RBP18.07■□□□□ 0.48
COL7A1-206ENST00000466591 LAMA1P25391 3075 aa18.07■□□□□ 0.48
COL7A1-206ENST00000466591 ASCC3Q8N3C0 2202 aaKnown RBP18.07■□□□□ 0.48
COL7A1-206ENST00000466591 DAB1O75553 588 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 ERBB2P04626 1255 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 FTH1P19P0C7X4 201 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 ZNF883P0CG24 379 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 C5AR1P21730 350 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 NOS2P35228 1153 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 STK19P49842 368 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-206ENST00000466591 SULT1E1P49888 294 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 CCT8P50990 548 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 PITX1P78337 314 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-206ENST00000466591 SLC6A3Q01959 620 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 KIF19Q2TAC6 998 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 CCDC157Q569K6 752 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 SLC45A4Q5BKX6 768 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 NCEH1Q6PIU2 408 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 STK40Q8N2I9 435 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 OR8D1Q8WZ84 308 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 MRGPRX3Q96LB0 322 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 SLC2A13Q96QE2 648 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 CDC6Q99741 560 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 RRN3Q9NYV6 651 aa18.06■□□□□ 0.48
COL7A1-206ENST00000466591 SLCO3A1Q9UIG8 710 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms