RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MYL4P12829 197 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 ZXDBP98169 803 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 SEMA3BQ13214 749 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 ARL13BQ3SXY8 428 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 ARTNQ5T4W7 220 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 BBS12Q6ZW61 710 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 PLD5Q8N7P1 536 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 TCEAL4Q96EI5 215 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 ZNF670Q9BS34 389 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 FOXP3Q9BZS1 431 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 CDC42EP4Q9H3Q1 356 aaKnown RBP19.17■□□□□ 0.66
CAPN3-209ENST00000466222 DNMT3BQ9UBC3 853 aaKnown RBP19.17■□□□□ 0.66
CAPN3-209ENST00000466222 DNMT3LQ9UJW3 386 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 PATJQ8NI35 1801 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 OAS1P00973 400 aaKnown RBP19.16■□□□□ 0.66
CAPN3-209ENST00000466222 IFI35P80217 286 aaPredicted RBP19.16■□□□□ 0.66
CAPN3-209ENST00000466222 PIGWQ7Z7B1 504 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 C14orf80Q86SX3 495 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 PRUNE1Q86TP1 453 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 ARL14EPQ8N8R7 260 aaPredicted RBP19.16■□□□□ 0.66
CAPN3-209ENST00000466222 ACTL9Q8TC94 416 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 EPS8L3Q8TE67 593 aaKnown RBP19.16■□□□□ 0.66
CAPN3-209ENST00000466222 FAF2Q96CS3 445 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 CCDC114Q96M63 670 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 OLA1Q9NTK5 396 aaKnown RBP19.16■□□□□ 0.66
CAPN3-209ENST00000466222 DNPEPQ9ULA0 475 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 ASB3Q9Y575 518 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 HEY1Q9Y5J3 304 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 HS3ST4Q9Y661 456 aa19.16■□□□□ 0.66
CAPN3-209ENST00000466222 LRIG2O94898 1065 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 OTUD4Q01804 1114 aaKnown RBP19.15■□□□□ 0.66
CAPN3-209ENST00000466222 SLC10A2Q12908 348 aaPredicted RBP19.15■□□□□ 0.66
CAPN3-209ENST00000466222 PPP2R5DQ14738 602 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 TRIP4Q15650 581 aaPredicted RBP19.15■□□□□ 0.66
CAPN3-209ENST00000466222 PIK3R6Q5UE93 754 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 PDE12Q6L8Q7 609 aaKnown RBP19.15■□□□□ 0.66
CAPN3-209ENST00000466222 PSTKQ8IV42 348 aaKnown RBP19.15■□□□□ 0.66
CAPN3-209ENST00000466222 TP53INP2Q8IXH6 220 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 TTC16Q8NEE8 873 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 CCT6BQ92526 530 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 ATXN3LQ9H3M9 355 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 IGFLR1Q9H665 355 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 ARHGEF4Q9NR80 690 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 SAMD15Q9P1V8 674 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 UXTQ9UBK9 157 aaPredicted RBP19.15■□□□□ 0.66
CAPN3-209ENST00000466222 CCDC195A0A1B0GUA6 201 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 RASSF9O75901 435 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 GSTA1P08263 222 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 GBE1Q04446 702 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 CCNG2Q16589 344 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 BRMS1LQ5PSV4 323 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 RFX8Q6ZV50 586 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 RELL1Q8IUW5 271 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 MAB21L3Q8N8X9 362 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.15■□□□□ 0.66
CAPN3-209ENST00000466222 MYEOVQ96EZ4 313 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 EFR3BQ9Y2G0 817 aa19.15■□□□□ 0.66
CAPN3-209ENST00000466222 SMIM23A6NLE4 172 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 EEF2KO00418 725 aaKnown RBP19.14■□□□□ 0.65
CAPN3-209ENST00000466222 LIASO43766 372 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 DNAJC8O75937 253 aaPredicted RBP19.14■□□□□ 0.65
CAPN3-209ENST00000466222 TTC4O95801 387 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 IGLV3-27P01718 113 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 IRF1P10914 325 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 IVDP26440 423 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 ARL4AP40617 200 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 AIF1P55008 147 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 LMNB2Q03252 620 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 SLC5A9Q2M3M2 681 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 SLC9A4Q6AI14 798 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 CCDC25Q86WR0 208 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 ELMOD1Q8N336 334 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 CCDC89Q8N998 374 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 PRUNE2Q8WUY3 3088 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 SMG9Q9H0W8 520 aaKnown RBP19.14■□□□□ 0.65
CAPN3-209ENST00000466222 ASAH2Q9NR71 780 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 CDH22Q9UJ99 828 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 NEU3Q9UQ49 428 aa19.14■□□□□ 0.65
CAPN3-209ENST00000466222 CCT8L1PA6NM43 557 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 APOL1O14791 398 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 KLKB1P03952 638 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 RGS19P49795 217 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 NRLP54845 237 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 DPYSQ14117 519 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 DUSP6Q16828 381 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 NCBP2-AS2Q69YL0 99 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 POTEHQ6S545 545 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 TMC5Q6UXY8 1006 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 GRASPQ7Z6J2 395 aaPredicted RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 CCHCR1Q8TD31 782 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 ZNF707Q96C28 371 aaPredicted RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 ZFRQ96KR1 1074 aaKnown RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 HAPLN3Q96S86 360 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 TP73O15350 636 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 RHOP08100 348 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 ERCC2P18074 760 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 HDCP19113 662 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 EPHB2P29323 1055 aa19.13■□□□□ 0.65
CAPN3-209ENST00000466222 MLLT6P55198 1093 aaPredicted RBP19.13■□□□□ 0.65
CAPN3-209ENST00000466222 TPI1P60174 286 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms