RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 WDCPQ9H6R7 721 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 YY1AP1Q9H869 796 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 CHRAC1Q9NRG0 131 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 C20orf96Q9NUD7 363 aaPredicted RBP16.76■□□□□ 0.27
SLX4-202ENST00000466154 BFARQ9NZS9 450 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 M0QZ92 97 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 MOCS2O96007 188 aaPredicted RBP16.75■□□□□ 0.27
SLX4-202ENST00000466154 BDNFP23560 247 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 MAGEA6P43360 314 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 GLRBP48167 497 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 SLC25A3Q00325 362 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 IRF9Q00978 393 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 TEX44Q53QW1 395 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 CFAP157Q5JU67 520 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 DCLK2Q8N568 766 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 C7orf26Q96N11 449 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 NPY6RQ99463 290 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 OXCT2Q9BYC2 517 aaPredicted RBP16.75■□□□□ 0.27
SLX4-202ENST00000466154 THAP1Q9NVV9 213 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 NFKB1P19838 968 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 PTPN3P26045 913 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 WASHC2DQ5SRD0 308 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
SLX4-202ENST00000466154 FAM35AQ86V20 835 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 C3orf58Q8NDZ4 430 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 SHKBP1Q8TBC3 707 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 SMOQ99835 787 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 DCLRE1BQ9H816 532 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 IARS2Q9NSE4 1012 aaKnown RBP16.75■□□□□ 0.27
SLX4-202ENST00000466154 MIOSQ9NXC5 875 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 EMCNQ9ULC0 261 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 WASF2Q9Y6W5 498 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 HACD1B0YJ81 288 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 CCNFP41002 786 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 CDC42EP1Q00587 391 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 CXCL17Q6UXB2 119 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 PLD6Q8N2A8 252 aaKnown RBP16.75■□□□□ 0.27
SLX4-202ENST00000466154 TUBB6Q9BUF5 446 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 ATXN3LQ9H3M9 355 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 SNX15Q9NRS6 342 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 OR12D3Q9UGF7 316 aa16.75■□□□□ 0.27
SLX4-202ENST00000466154 APOBEC2Q9Y235 224 aaKnown RBP16.75■□□□□ 0.27
SLX4-202ENST00000466154 NEMP1O14524 444 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GLRA3O75311 464 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 B3GAT3O94766 335 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 FYNP06241 537 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
SLX4-202ENST00000466154 FAM110CQ1W6H9 321 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GNASQ5JWF2 1037 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 C1orf146Q5VVC0 180 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 OTOP3Q7RTS5 596 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 SLC39A10Q9ULF5 831 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 ST3GAL5Q9UNP4 418 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 CDY2AQ9Y6F7 541 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 PLIN3O60664 434 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 WFS1O76024 890 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 LTFP02788 710 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 THP07101 528 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GNAZP19086 355 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 ZBTB17Q13105 803 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 LRRC36Q1X8D7 754 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 SNX30Q5VWJ9 437 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 SPATA6LQ8N4H0 392 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 PIWIL2Q8TC59 973 aaKnown RBP16.74■□□□□ 0.27
SLX4-202ENST00000466154 ZNF778Q96MU6 729 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 OSBPL1AQ9BXW6 950 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 PPP1R12CQ9BZL4 782 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 PACSIN3Q9UKS6 424 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GNEQ9Y223 722 aaKnown RBP16.74■□□□□ 0.27
SLX4-202ENST00000466154 PLXNA1Q9UIW2 1896 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GOLGA8QA0A0J9YX86 632 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 MBLAC1A4D2B0 266 aaPredicted RBP16.74■□□□□ 0.27
SLX4-202ENST00000466154 GOLGA8OA6NCC3 632 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 MYADML2A6NDP7 307 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GOLGA8NF8WBI6 632 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 TRAFD1O14545 582 aaPredicted RBP16.74■□□□□ 0.27
SLX4-202ENST00000466154 DNAJC6O75061 913 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 CIB2O75838 187 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 PGK1P00558 417 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 KCNE1P15382 129 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 PAX7P23759 505 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GARSP41250 739 aaKnown RBP16.74■□□□□ 0.27
SLX4-202ENST00000466154 BRCC3P46736 316 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 TSNAXIP1Q2TAA8 658 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 SPATA22Q8NHS9 363 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 DNAJC9Q8WXX5 260 aa16.74■□□□□ 0.27
SLX4-202ENST00000466154 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 E9PBE3 544 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 KLF11O14901 512 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 CLGNO14967 610 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 KLHL41O60662 606 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 NEBLO76041 1014 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 GSTA2P09210 222 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 RALBP11234 206 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 AXLP30530 894 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 CRYBB1P53674 252 aaPredicted RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 FSCN1Q16658 493 aaKnown RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.73■□□□□ 0.27
SLX4-202ENST00000466154 ACVR1CQ8NER5 493 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 SCYL1Q96KG9 808 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms