RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 TTC34A8MYJ7 566 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 WNT1P04628 370 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 CD44P16070 742 aaKnown RBP23.42■■□□□ 1.34
USP4-208ENST00000464168 GPD2P43304 727 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 SFSWAPQ12872 951 aaKnown RBP23.42■■□□□ 1.34
USP4-208ENST00000464168 CDH18Q13634 790 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 KCNJ12Q14500 433 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 SOWAHCQ53LP3 525 aaPredicted RBP23.42■■□□□ 1.34
USP4-208ENST00000464168 CCDC157Q569K6 752 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 ARHGEF19Q8IW93 802 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 XPO7Q9UIA9 1087 aaKnown RBP23.42■■□□□ 1.34
USP4-208ENST00000464168 SLCO3A1Q9UIG8 710 aa23.42■■□□□ 1.34
USP4-208ENST00000464168 PSMA7O14818 248 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 RNASEH2AO75792 299 aaKnown RBP23.41■■□□□ 1.34
USP4-208ENST00000464168 LUC7L3O95232 432 aaKnown RBP23.41■■□□□ 1.34
USP4-208ENST00000464168 MOCS2O96007 188 aaPredicted RBP23.41■■□□□ 1.34
USP4-208ENST00000464168 SRPRAP08240 638 aaKnown RBP23.41■■□□□ 1.34
USP4-208ENST00000464168 SLC8A1P32418 973 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 SYPL2Q5VXT5 272 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 DHRS13Q6UX07 377 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 TAC4Q86UU9 113 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 OR2T34Q8NGX1 318 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 FAM149B1Q96BN6 582 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 DHTKD1Q96HY7 919 aaPredicted RBP23.41■■□□□ 1.34
USP4-208ENST00000464168 OMDQ99983 421 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 SCUBE2Q9NQ36 999 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 FTSJ1Q9UET6 329 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 FZD4Q9ULV1 537 aa23.41■■□□□ 1.34
USP4-208ENST00000464168 ITIH6Q6UXX5 1313 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 EDDM13A0A1B0GTR0 161 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 LRRC72A6NJI9 287 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 WNT9AO14904 365 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 P4HA2O15460 535 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 ECT2LQ008S8 904 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 GCNT1Q02742 428 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 INAVAQ3KP66 663 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 CCDC40Q4G0X9 1142 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 ISM2Q6H9L7 571 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 BEND5Q7L4P6 421 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 GATAD2AQ86YP4 633 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 CCDC117Q8IWD4 279 aaPredicted RBP23.4■■□□□ 1.34
USP4-208ENST00000464168 APCDD1Q8J025 514 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 LGI2Q8N0V4 545 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 AADATQ8N5Z0 425 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 KREMEN1Q96MU8 473 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 ELF4Q99607 663 aaPredicted RBP23.4■■□□□ 1.34
USP4-208ENST00000464168 ST7Q9NRC1 585 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 CNTN6Q9UQ52 1028 aa23.4■■□□□ 1.34
USP4-208ENST00000464168 GCN1Q92616 2671 aaKnown RBP23.39■■□□□ 1.34
USP4-208ENST00000464168 A0A1W2PR77 199 aa23.39■■□□□ 1.33
USP4-208ENST00000464168 SART1O43290 800 aaKnown RBP23.39■■□□□ 1.33
USP4-208ENST00000464168 CCR5P51681 352 aa23.39■■□□□ 1.33
USP4-208ENST00000464168 CETN1Q12798 172 aa23.39■■□□□ 1.33
USP4-208ENST00000464168 STIM1Q13586 685 aa23.39■■□□□ 1.33
USP4-208ENST00000464168 SHBQ15464 509 aa23.39■■□□□ 1.33
USP4-208ENST00000464168 ZC3H12AQ5D1E8 599 aaKnown RBP23.39■■□□□ 1.33
USP4-208ENST00000464168 PDCD7Q8N8D1 485 aaKnown RBP23.39■■□□□ 1.33
USP4-208ENST00000464168 EHBP1Q8NDI1 1231 aa23.39■■□□□ 1.33
USP4-208ENST00000464168 SKA1Q96BD8 255 aa23.39■■□□□ 1.33
USP4-208ENST00000464168 RPL10LQ96L21 214 aaKnown RBP23.39■■□□□ 1.33
USP4-208ENST00000464168 GOLGA6L4A6NEF3 574 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 MOCS3O95396 460 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 GOT1P17174 413 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 CD38P28907 300 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 PSMD8P48556 350 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 RAP1GAP2Q684P5 730 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 TTI2Q6NXR4 508 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 DENND1BQ6P3S1 775 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 STK40Q8N2I9 435 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 SAP25Q8TEE9 199 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 STK32AQ8WU08 396 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 PTPRN2Q92932 1015 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 TIGD1Q96MW7 591 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 SLC4A5Q9BY07 1137 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 AASDHPPTQ9NRN7 309 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 CEP83Q9Y592 693 aa23.38■■□□□ 1.33
USP4-208ENST00000464168 BPTFQ12830 3046 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 CBX4O00257 560 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 TACR2P21452 398 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 C5AR1P21730 350 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 ACADSBP45954 432 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 STK19P49842 368 aaPredicted RBP23.37■■□□□ 1.33
USP4-208ENST00000464168 ADPRHP54922 357 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 SND1Q7KZF4 910 aaKnown RBP eCLIP23.37■■□□□ 1.33
USP4-208ENST00000464168 TMPRSS12Q86WS5 348 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 LRIG1Q96JA1 1093 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 CYTH4Q9UIA0 394 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 HOOK1Q9UJC3 728 aaKnown RBP23.37■■□□□ 1.33
USP4-208ENST00000464168 MAN1B1Q9UKM7 699 aa23.37■■□□□ 1.33
USP4-208ENST00000464168 PLXNA2O75051 1894 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 CAPN9O14815 690 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 ADH1BP00325 375 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 IGLV3-25P01717 112 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 APOEP02649 317 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 RNF219Q5W0B1 726 aaPredicted RBP23.36■■□□□ 1.33
USP4-208ENST00000464168 TMEM110Q86TL2 294 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 CHSY1Q86X52 802 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 OR14C36Q8NHC7 312 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 BTN2A3PQ96KV6 586 aa23.36■■□□□ 1.33
USP4-208ENST00000464168 TRIM62Q9BVG3 475 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms