RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 A0A1W2PQC6 194 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 PATE3B3GLJ2 98 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 ZBTB24O43167 697 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 CNTN5O94779 1100 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 ENDOD1O94919 500 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 CAVIN2O95810 425 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 F9P00740 461 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 FERP16591 822 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 RFC1P35251 1148 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 FANCCQ00597 558 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 RPL6Q02878 288 aaKnown RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 LMNB2Q03252 620 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 PLEKHG6Q3KR16 790 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 C5orf22Q49AR2 442 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 ALFQ53S48 1182 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 BRMS1LQ5PSV4 323 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 MON1BQ7L1V2 547 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 FAM131BQ86XD5 332 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 ZNF557Q8N988 423 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 ALG14Q96F25 216 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 PRSS16Q9NQE7 514 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 ITM2CQ9NQX7 267 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 DLL3Q9NYJ7 618 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 SLCO3A1Q9UIG8 710 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.37□□□□□ -0.27
XRN1-203ENST00000463916 A0A1B0GVM2 712 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 TCRBV5S1A1TA0A578 114 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 TCAF2A6NFQ2 919 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 C2CD4BA6NLJ0 364 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 ZNF217O75362 1048 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 PDGFRAP16234 1089 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 TPMTP51580 245 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 BYSLQ13895 437 aaKnown RBP13.37□□□□□ -0.27
XRN1-203ENST00000463916 RABGAP1LQ5R372 815 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 DNAAF5Q86Y56 855 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 SLC41A1Q8IVJ1 513 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 SIPA1Q96FS4 1042 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 RPL10LQ96L21 214 aaKnown RBP13.37□□□□□ -0.27
XRN1-203ENST00000463916 MAGEB5Q9BZ81 275 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 USP36Q9P275 1121 aaKnown RBP13.37□□□□□ -0.27
XRN1-203ENST00000463916 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 ERVW-1Q9UQF0 538 aa13.37□□□□□ -0.27
XRN1-203ENST00000463916 KRT3P12035 628 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 PTMSP20962 102 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 ITPKAP23677 461 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 RDXP35241 583 aaKnown RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 PBX1P40424 430 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 STK19P49842 368 aaPredicted RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 E2F5Q15329 346 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 CDO1Q16878 200 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 TTC39BQ5VTQ0 682 aaPredicted RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 SND1Q7KZF4 910 aaKnown RBP eCLIP13.36□□□□□ -0.27
XRN1-203ENST00000463916 METTL3Q86U44 580 aaKnown RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 CCDC117Q8IWD4 279 aaPredicted RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 PIGKQ92643 395 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 VPS45Q9NRW7 570 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 OR51B4Q9Y5P0 310 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 TNRC6BQ9UPQ9 1833 aaKnown RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 CEP192Q8TEP8 1941 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 CACNA1AO00555 2505 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 GSCP56915 257 aaPredicted RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 ECT2LQ008S8 904 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 WDR59Q6PJI9 974 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 ZNF571Q7Z3V5 609 aaPredicted RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 CYP2U1Q7Z449 544 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 PRCCQ92733 491 aaPredicted RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 TOE1Q96GM8 510 aaKnown RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 C1orf74Q96LT6 269 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 FEM1AQ9BSK4 669 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 AIPL1Q9NZN9 384 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 MPP6Q9NZW5 540 aa13.36□□□□□ -0.27
XRN1-203ENST00000463916 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
XRN1-203ENST00000463916 DRGXA6NNA5 263 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 PRR5-ARHGAP8B1AHC4 643 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 AP5Z1O43299 807 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 SIN3BO75182 1162 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 C7P10643 843 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 SDC4P31431 198 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 PLK1P53350 603 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 HDAC4P56524 1084 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 UBASH3AP57075 661 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 RPL7AP62424 266 aaKnown RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 ARHGAP8P85298 464 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 MTA1Q13330 715 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 HNRNPA1L2Q32P51 320 aaKnown RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 SPDYCQ5MJ68 293 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 ACAD10Q6JQN1 1059 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 SLC36A4Q6YBV0 504 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 MCOLN2Q8IZK6 566 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 C3orf20Q8ND61 904 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 CENPIQ92674 756 aaPredicted RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 WSB2Q9NYS7 404 aaPredicted RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 TBC1D30Q9Y2I9 924 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 IGLV3-10A0A075B6K4 115 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms