RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC18A3Q16572 532 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 ACBD5Q5T8D3 534 aaPredicted RBP18.24■□□□□ 0.51
VPS52-214ENST00000463486 FAM72AQ5TYM5 149 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 MBLAC2Q68D91 279 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 FAM72DQ6L9T8 149 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 DCUN1D2Q6PH85 259 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 VPS36Q86VN1 386 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 FAM72BQ86X60 149 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 CHPFQ8IZ52 775 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 APCDD1Q8J025 514 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 AHI1Q8N157 1196 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 ZNF557Q8N988 423 aaPredicted RBP18.24■□□□□ 0.51
VPS52-214ENST00000463486 SUMF1Q8NBK3 374 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 FNIP1Q8TF40 1166 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 FAM122AQ96E09 287 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 CIPCQ9C0C6 399 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 THAP2Q9H0W7 228 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 TMEM245Q9H330 911 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 TYW5A2RUC4 315 aaKnown RBP18.23■□□□□ 0.51
VPS52-214ENST00000463486 E9PAM4 449 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 NPC1O15118 1278 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 CLDN11O75508 207 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 CYP1A2P05177 515 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 C7P10643 843 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 SRSF5Q13243 272 aaKnown RBP18.23■□□□□ 0.51
VPS52-214ENST00000463486 PITRM1Q5JRX3 1037 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 CCDC122Q5T0U0 273 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 CYP4V2Q6ZWL3 525 aaPredicted RBP18.23■□□□□ 0.51
VPS52-214ENST00000463486 MDGA1Q8NFP4 955 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 TSTD1Q8NFU3 115 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 CYB5D2Q8WUJ1 264 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 ATRIPQ8WXE1 791 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 ARHGEF26Q96DR7 871 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 TRIM11Q96F44 468 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 MRGPRX3Q96LB0 322 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 EPC1Q9H2F5 836 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 MPP6Q9NZW5 540 aa18.23■□□□□ 0.51
VPS52-214ENST00000463486 KIAA1522Q9P206 1035 aaPredicted RBP18.23■□□□□ 0.51
VPS52-214ENST00000463486 EML5Q05BV3 1969 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 AKR1B15C9JRZ8 316 aaPredicted RBP18.22■□□□□ 0.51
VPS52-214ENST00000463486 H0Y626 953 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 DLDP09622 509 aaKnown RBP18.22■□□□□ 0.51
VPS52-214ENST00000463486 HOXB2P14652 356 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 PRKCHP24723 683 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 MZF1P28698 734 aaPredicted RBP18.22■□□□□ 0.51
VPS52-214ENST00000463486 CSKP41240 450 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 CTSOP43234 321 aaPredicted RBP18.22■□□□□ 0.51
VPS52-214ENST00000463486 GALCP54803 685 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 CDH4P55283 916 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 CDH18Q13634 790 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 PLEKHG6Q3KR16 790 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 ZC3H14Q6PJT7 736 aaKnown RBP18.22■□□□□ 0.51
VPS52-214ENST00000463486 ASCL5Q7RTU5 278 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 CNGA4Q8IV77 575 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 SEMA4AQ9H3S1 761 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 MYO1AQ9UBC5 1043 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 PPARGC1AQ9UBK2 798 aaKnown RBP18.22■□□□□ 0.51
VPS52-214ENST00000463486 OR12D3Q9UGF7 316 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 RAD54BQ9Y620 910 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 SCINQ9Y6U3 715 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 DOCK4Q8N1I0 1966 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 FAM186AA6NE01 2351 aa18.22■□□□□ 0.51
VPS52-214ENST00000463486 ANKRD62A6NC57 917 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 AXIN1O15169 862 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 GABRG2P18507 467 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 SEMA3BQ13214 749 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 SLC12A1Q13621 1099 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 ANO7Q6IWH7 933 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 PYROXD2Q8N2H3 581 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 UCMAQ8WVF2 138 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 PEBP4Q96S96 227 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 FEM1AQ9BSK4 669 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 PACSIN1Q9BY11 444 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 NHEJ1Q9H9Q4 299 aaPredicted RBP18.21■□□□□ 0.51
VPS52-214ENST00000463486 FZD10Q9ULW2 581 aa18.21■□□□□ 0.51
VPS52-214ENST00000463486 CKAP5Q14008 2032 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.2■□□□□ 0.5
VPS52-214ENST00000463486 TCRBV21S2A2A0A5A6 115 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 PRR23AA6NEV1 266 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 SRGAP2O75044 1071 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 LRIG2O94898 1065 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 TPM1P09493 284 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 POLR2EP19388 210 aaKnown RBP18.2■□□□□ 0.5
VPS52-214ENST00000463486 PSMA2P25787 234 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 CNR2P34972 360 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 ZNF177Q13360 481 aaPredicted RBP18.2■□□□□ 0.5
VPS52-214ENST00000463486 ARL13BQ3SXY8 428 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 LRRC31Q6UY01 552 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 SLFN11Q7Z7L1 901 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 NLRP14Q86W24 1093 aa18.2■□□□□ 0.5
VPS52-214ENST00000463486 MRPL47Q9HD33 250 aaKnown RBP18.2■□□□□ 0.5
VPS52-214ENST00000463486 POLMQ9NP87 494 aaPredicted RBP18.2■□□□□ 0.5
VPS52-214ENST00000463486 ZNHIT6Q9NWK9 470 aaKnown RBP18.2■□□□□ 0.5
VPS52-214ENST00000463486 LRCH4O75427 683 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 ATP5BP06576 529 aaKnown RBP18.19■□□□□ 0.5
VPS52-214ENST00000463486 HLA-EP13747 358 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 PTPRZ1P23471 2315 aaPredicted RBP18.19■□□□□ 0.5
VPS52-214ENST00000463486 L1CAMP32004 1257 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 COPAP53621 1224 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 CAMK2GQ13555 558 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms