RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 GNA14O95837 355 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 KRT19P08727 400 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 BMP2P12643 396 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 KRT10P13645 584 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CYP3A5P20815 502 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CCR10P46092 362 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ALDH1A3P47895 512 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 RNF144AP50876 292 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 VAMP7P51809 220 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 GUCY2FP51841 1108 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 AP3M2P53677 418 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 GYS2P54840 703 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 RELBQ01201 579 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 RPL6Q02878 288 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 SOX4Q06945 474 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 DUSP4Q13115 394 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 PLD1Q13393 1074 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 SMAD1Q15797 465 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ZBTB6Q15916 424 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 DUOXA2Q1HG44 320 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.28□□□□□ -1.44e-18■■□□□ 12.2
SMARCC1-204ENST00000462198 CCDC40Q4G0X9 1142 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 PREPLQ4J6C6 727 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CCDC157Q569K6 752 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 SPATA1Q5VX52 437 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CC2D1AQ6P1N0 951 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 PRICKLE2Q7Z3G6 844 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 SDCCAG8Q86SQ7 713 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 TADA2BQ86TJ2 420 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 FAM114A1Q8IWE2 563 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 DHX40Q8IX18 779 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 MEIOBQ8N635 442 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 PHC3Q8NDX5 983 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 PMEPA1Q969W9 287 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 FAXDC2Q96IV6 333 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ANKRD36BP1Q96IX9 119 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CEP63Q96MT8 703 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CGRRF1Q99675 332 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CDC6Q99741 560 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 TRIM4Q9C037 500 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 MTMR12Q9C0I1 747 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 MMRN2Q9H8L6 949 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ZNF395Q9H8N7 513 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ECT2Q9H8V3 914 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ABCB6Q9NP58 842 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 INTS13Q9NVM9 706 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 IRAK4Q9NWZ3 460 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ARMCX3Q9UH62 379 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 YIPF1Q9Y548 306 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 ASB3Q9Y575 518 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.28□□□□□ -1.44e-14■■■■□ 20
SMARCC1-204ENST00000462198 DENND4CQ5VZ89 1909 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 CACNA1DQ01668 2161 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 LRRK2Q5S007 2527 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 LRRIQ3A6PVS8 624 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 EIF3CLB5ME19 914 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 PIRO00625 290 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 IKBKBO14920 756 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 SYN3O14994 580 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 STX10O60499 249 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 TADA3O75528 432 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 NEBLO76041 1014 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 VNN2O95498 520 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 ITGB3P05106 788 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 JUPP14923 745 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 CPB1P15086 417 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 POLR2BP30876 1174 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 PNPLA4P41247 253 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 RPS6KA3P51812 740 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 MNAT1P51948 309 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 DLG4P78352 724 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 RBP5P82980 135 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 CYP4F8P98187 520 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 PTSQ03393 145 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 TLE3Q04726 772 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 SFSWAPQ12872 951 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 BFSP1Q12934 665 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 BIRC3Q13489 604 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 TRPC3Q13507 836 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 PDGFRLQ15198 375 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 TCERG1LQ5VWI1 586 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 C9orf57Q5W0N0 161 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 SLC36A4Q6YBV0 504 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 DBX2Q6ZNG2 339 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 C11orf57Q6ZUT1 292 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 TRIM74Q86UV6 250 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 TRIM73Q86UV7 250 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 ZC3H3Q8IXZ2 948 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 DRC7Q8IY82 874 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 CMTM8Q8IZV2 173 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 CCDC150Q8NCX0 1101 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 OR5B17Q8NGF7 314 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 PARD3BQ8TEW8 1205 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 HMGB4Q8WW32 186 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 FGF11Q92914 225 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 NXPE2Q96DL1 559 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms