RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 IDEP14735 1019 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 FGFR4P22455 802 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 RPL13P26373 211 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 CASP5P51878 434 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 POLGP54098 1239 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 SARNPP82979 210 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 TLE1Q04724 770 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 BTKQ06187 659 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 NSUN2Q08J23 767 aaKnown RBP eCLIP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 COASYQ13057 564 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 SMAD4Q13485 552 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 ITGA7Q13683 1181 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 FGL2Q14314 439 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 POSTNQ15063 836 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 PKN2Q16513 984 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 LRRC26Q2I0M4 334 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 KLHL40Q2TBA0 621 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 GRAMD1BQ3KR37 738 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 MARCH8Q5T0T0 291 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 CCDC183Q5T5S1 534 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 ERAP2Q6P179 960 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 TRMT10BQ6PF06 316 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 C1orf186Q6ZWK4 172 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 PLPPR4Q7Z2D5 763 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 TAX1BP1Q86VP1 789 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 SFR1Q86XK3 245 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 LILRA3Q8N6C8 439 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 METTL13Q8N6R0 699 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 SYT2Q8N9I0 419 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 IQUBQ8NA54 791 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 GABPB2Q8TAK5 448 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 IFI44Q8TCB0 444 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 CASKIN2Q8WXE0 1202 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 NELL1Q92832 810 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 NACC2Q96BF6 587 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 ZBTB8AQ96BR9 441 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 DNAJC19Q96DA6 116 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 MTFMTQ96DP5 389 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 AJUBAQ96IF1 538 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 SGCZQ96LD1 299 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 SELENOOQ9BVL4 669 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 TRIM9Q9C026 710 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 XPO4Q9C0E2 1151 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 IQCGQ9H095 443 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 TRPV6Q9H1D0 765 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 POLR3FQ9H1D9 316 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 TNMDQ9H2S6 317 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 ZFP64Q9NPA5 681 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 STARD7Q9NQZ5 370 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 IRAK4Q9NWZ3 460 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 ETAA1Q9NY74 926 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 POLG2Q9UHN1 485 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 TUBE1Q9UJT0 475 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 CDC42EP3Q9UKI2 254 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 GDAQ9Y2T3 454 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 Q9Y3F1 56 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 LTBP2Q14767 1821 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 PTPRSQ13332 1948 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 ANK1P16157 1881 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 UMODL1Q5DID0 1318 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 MICAL3Q7RTP6 2002 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 SYCE3A1L190 88 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 C17orf102A2RUQ5 167 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 LRRIQ4A6NIV6 560 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 TISP43B9A030 160 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 F8VZ95 297 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 DNM1LO00429 736 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 ALDH1A2O94788 518 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 PLA2G1BP04054 148 aaKnown RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 RPN1P04843 607 aaKnown RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 TYRP14679 529 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 BTF3P20290 206 aaKnown RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 KLRC1P26715 233 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 NMT1P30419 496 aaKnown RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 ADSLP30566 484 aaPredicted RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 HOXC8P31273 242 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 KCNQ1P51787 676 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 ADAM17P78536 824 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 CAPSQ13938 189 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 GIT2Q14161 759 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 TRIM60Q495X7 471 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 PREPLQ4J6C6 727 aaPredicted RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 EFCAB12Q6NXP0 572 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 NFRKBQ6P4R8 1299 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 MTHFD1LQ6UB35 978 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 PRR23BQ6ZRT6 265 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 C11orf57Q6ZUT1 292 aaPredicted RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 TMEFF1Q8IYR6 380 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 LINC01465Q8N7H1 131 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 CCDC89Q8N998 374 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 PCSK9Q8NBP7 692 aaKnown RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 PLA2G15Q8NCC3 412 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 KIAA0895Q8NCT3 520 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 DEPTORQ8TB45 409 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 ZFPM2Q8WW38 1151 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 DNAJB3Q8WWF6 145 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 SLC35A4Q96G79 324 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 ABHD8Q96I13 439 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms