RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PATE3B3GLJ2 98 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 SRPRAP08240 638 aaKnown RBP16.63■□□□□ 0.25
COL7A1-203ENST00000459756 TFE3P19532 575 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ITPKAP23677 461 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 FLT3P36888 993 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF165P49910 485 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 DEUP1Q05D60 604 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ARID5BQ14865 1188 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 PLEKHG6Q3KR16 790 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ACBD5Q5T8D3 534 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-203ENST00000459756 RABEPKQ7Z6M1 372 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 CIR1Q86X95 450 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF366Q8N895 744 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 CEP76Q8TAP6 659 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 FOXJ1Q92949 421 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 TOE1Q96GM8 510 aaKnown RBP16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF419Q96HQ0 510 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-203ENST00000459756 HSPA12BQ96MM6 686 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 PPP1R9BQ96SB3 815 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 TBCBQ99426 244 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 EDEM2Q9BV94 578 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 TKTL2Q9H0I9 626 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 PRSS16Q9NQE7 514 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 TMEM74BQ9NUR3 256 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 WSB2Q9NYS7 404 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-203ENST00000459756 VANGL2Q9ULK5 521 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ERVW-1Q9UQF0 538 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 HS3ST4Q9Y661 456 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 ADCY5O95622 1261 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 CCDC172P0C7W6 258 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 UNGP13051 313 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-203ENST00000459756 PLK1P53350 603 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 IRX4P78413 519 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 ECT2LQ008S8 904 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 CENPCQ03188 943 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 ZBTB16Q05516 673 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 SULT2A1Q06520 285 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 NFKBIBQ15653 356 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 HNRNPA1L2Q32P51 320 aaKnown RBP16.62■□□□□ 0.25
COL7A1-203ENST00000459756 C5orf22Q49AR2 442 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 TRIM61Q5EBN2 209 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 SYCP2LQ5T4T6 812 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 RNF219Q5W0B1 726 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-203ENST00000459756 SLC23A3Q6PIS1 610 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 SLC41A1Q8IVJ1 513 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 CADM4Q8NFZ8 388 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 IGSF8Q969P0 613 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 MYO19Q96H55 970 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 MRGPRX3Q96LB0 322 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 NUSAP1Q9BXS6 441 aaKnown RBP16.62■□□□□ 0.25
COL7A1-203ENST00000459756 SIK2Q9H0K1 926 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
COL7A1-203ENST00000459756 GON4LQ3T8J9 2241 aa16.62■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 CLDN11O75508 207 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 PDGFRAP16234 1089 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 RDXP35241 583 aaKnown RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 NSFP46459 744 aaKnown RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 RPS14P62263 151 aaKnown RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF177Q13360 481 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 DUOXA1Q1HG43 343 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 CLEC16AQ2KHT3 1053 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 WDR45BQ5MNZ6 344 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 CXorf57Q6NSI4 855 aaKnown RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 TRNP1Q6NT89 227 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 BNIPLQ7Z465 357 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 CACUL1Q86Y37 369 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 APCDD1Q8J025 514 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 SLC30A5Q8TAD4 765 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 C1orf74Q96LT6 269 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 CFAP57Q96MR6 1250 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 PCDHB18PQ96TA0 734 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 C11orf70Q9BRQ4 267 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 GPR174Q9BXC1 333 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 RSPH9Q9H1X1 276 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 METTL5Q9NRN9 209 aaKnown RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 MYO6Q9UM54 1294 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 ITIH6Q6UXX5 1313 aa16.61■□□□□ 0.25
COL7A1-203ENST00000459756 ATXN2Q99700 1313 aaKnown RBP16.61■□□□□ 0.25
COL7A1-203ENST00000459756 PI4KAP42356 2102 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 SYCE3A1L190 88 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 TARSL2A2RTX5 802 aaKnown RBP16.6■□□□□ 0.25
COL7A1-203ENST00000459756 I6L893 689 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-203ENST00000459756 TM4SF5O14894 197 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 TEX33O43247 280 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 DNTTP04053 509 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 FERP16591 822 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 CTSOP43234 321 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-203ENST00000459756 CDH4P55283 916 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF776Q68DI1 518 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-203ENST00000459756 LRRC31Q6UY01 552 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 C14orf80Q86SX3 495 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 PHF13Q86YI8 300 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-203ENST00000459756 AGPAT1Q99943 283 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 PCED1AQ9H1Q7 454 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 TMEM9BQ9NQ34 198 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 ANLNQ9NQW6 1124 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms