RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TMEM135Q86UB9 458 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 RSPH3Q86UC2 560 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ZNF567Q8N184 647 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 LZTR1Q8N653 840 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 PIP4K2CQ8TBX8 421 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 MICAL1Q8TDZ2 1067 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ZBTB10Q96DT7 871 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 SMARCD1Q96GM5 515 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 ZNF333Q96JL9 665 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 SERPINI1Q99574 410 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 OSMRQ99650 979 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 MED10Q9BTT4 135 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 CCDC106Q9BWC9 280 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 OSBPL1AQ9BXW6 950 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 AP5M1Q9H0R1 490 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 DPEP3Q9H4B8 488 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 PRDM12Q9H4Q4 367 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 CASS4Q9NQ75 786 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 FNIP2Q9P278 1114 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 SCOCQ9UIL1 159 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 DSEQ9UL01 958 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 RPS6KL1Q9Y6S9 549 aa9.06□□□□□ -0.96
HDAC3-202ENST00000459727 CCDC195A0A1B0GUA6 201 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 HMX2A2RU54 273 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 C17orf102A2RUQ5 167 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 PPEF2O14830 753 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 CCNT2O60583 730 aaKnown RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ANXA9O76027 345 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 PDGFRBP09619 1106 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 FGF3P11487 239 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 GM2AP17900 193 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 PAMP19021 973 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 IBSPP21815 317 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 PSMB4P28070 264 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 PSEN2P49810 448 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 TKTL1P51854 596 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 NRLP54845 237 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 SESN2P58004 480 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 DAOAP59103 153 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ADAM17P78536 824 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 CDH17Q12864 832 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 SEMA3BQ13214 749 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 MPP3Q13368 585 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 MTM1Q13496 603 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 RCN2Q14257 317 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 PCLAFQ15004 111 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ANO4Q32M45 955 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 KHDC1Q4VXA5 237 aaKnown RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ACSBG2Q5FVE4 666 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 GLRA4Q5JXX5 417 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 TEDDM1Q5T9Z0 273 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 C1orf146Q5VVC0 180 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 TIGD7Q6NT04 549 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 DSTYKQ6XUX3 929 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ALYREFQ86V81 257 aaKnown RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 KLHDC8BQ8IXV7 354 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ULK2Q8IYT8 1036 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 MPP5Q8N3R9 675 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 AFAP1L2Q8N4X5 818 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 DNAAF3Q8N9W5 541 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 RBM15BQ8NDT2 890 aaKnown RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ARNTL2Q8WYA1 636 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 TSGA13Q96PP4 275 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 KCNK16Q96T55 309 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 LGMNQ99538 433 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 ZNF184Q99676 751 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 MECRQ9BV79 373 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 MRM3Q9HC36 420 aaKnown RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 MRPL40Q9NQ50 206 aaKnown RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 SNX15Q9NRS6 342 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 KRT82Q9NSB4 513 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 NMRK1Q9NWW6 199 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 IL1RAPL1Q9NZN1 696 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 SEPT10Q9P0V9 454 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 NKX1-2Q9UD57 310 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 VTI1BQ9UEU0 232 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 FBXW11Q9UKB1 542 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 TLK1Q9UKI8 766 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 PRPF19Q9UMS4 504 aaKnown RBP9.05□□□□□ -0.96
HDAC3-202ENST00000459727 GINS2Q9Y248 185 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 DNAJC16Q9Y2G8 782 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 IPPQ9Y573 584 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 NME7Q9Y5B8 376 aa9.05□□□□□ -0.96
HDAC3-202ENST00000459727 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 MAGEA13PA6NCF6 341 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 A6NHS1 94 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 H0Y3Z8 333 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 FGF10O15520 208 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 CREB3O43889 395 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 TRIM13O60858 407 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 PIAS1O75925 651 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 CABYRO75952 493 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 HSPA4LO95757 839 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 LTFP02788 710 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ODC1P11926 461 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 YBX3P16989 372 aaKnown RBP eCLIP9.04□□□□□ -0.961e-7■□□□□ 10.3
HDAC3-202ENST00000459727 ERCC2P18074 760 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 TFE3P19532 575 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms