RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 IKBKEQ14164 716 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 EMC2Q15006 297 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 GRAMD4Q6IC98 578 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 SLFN12LQ6IEE8 588 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 KRT80Q6KB66 452 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 HACE1Q8IYU2 909 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ISOC1Q96CN7 298 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 RMND5BQ96G75 393 aaPredicted RBP10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ZNF597Q96LX8 424 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 NPAS2Q99743 824 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 MAGEB5Q9BZ81 275 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 PCDHAC1Q9H158 963 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ARMC7Q9H6L4 198 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 SLC38A7Q9NVC3 462 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ASNSD1Q9NWL6 643 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 MYRFQ9Y2G1 1151 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 WDR37Q9Y2I8 494 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 HES2Q9Y543 173 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 AHDC1Q5TGY3 1603 aaPredicted RBP10.55□□□□□ -0.72
CLIP4-208ENST00000456385 GPR25O00155 361 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 PRPSAP2O60256 369 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ALDH1A2O94788 518 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 JUNP05412 331 aaKnown RBP10.55□□□□□ -0.72
CLIP4-208ENST00000456385 PDGFRAP16234 1089 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 RXRGP48443 463 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 GTF2A2P52657 109 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ZNF143P52747 638 aaPredicted RBP10.55□□□□□ -0.72
CLIP4-208ENST00000456385 IRF9Q00978 393 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 GBE1Q04446 702 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 TRPC3Q13507 836 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 DLG2Q15700 870 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ZNF699Q32M78 642 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ARHGEF16Q5VV41 709 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 PODNQ7Z5L7 613 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 ZBTB46Q86UZ6 589 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 RNF169Q8NCN4 708 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 RP9Q8TA86 221 aaKnown RBP10.55□□□□□ -0.72
CLIP4-208ENST00000456385 RXFP2Q8WXD0 754 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 CNKSR2Q8WXI2 1034 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 RSPH1Q8WYR4 309 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 C12orf43Q96C57 262 aaKnown RBP10.55□□□□□ -0.72
CLIP4-208ENST00000456385 TWNKQ96RR1 684 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 CIB1Q99828 191 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 SLX1AQ9BQ83 275 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 TCHPQ9BT92 498 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 MRIQ9BWK5 157 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 PAIP1Q9H074 479 aaKnown RBP10.55□□□□□ -0.72
CLIP4-208ENST00000456385 LHX5Q9H2C1 402 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 PXMP2Q9NR77 195 aa10.55□□□□□ -0.72
CLIP4-208ENST00000456385 G3V2L1 256 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 FBP2O00757 339 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 ATE1O95260 518 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 MX2P20592 715 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 NUP107P57740 925 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 PRAMEP78395 509 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 ART3Q13508 389 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 MTX3Q5HYI7 312 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 SLC27A3Q5K4L6 730 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 METTL21CQ5VZV1 264 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 OGFOD2Q6N063 350 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 GPR180Q86V85 440 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 MCF2L2Q86YR7 1114 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 PGAM4Q8N0Y7 254 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 NETO2Q8NC67 525 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 UBA3Q8TBC4 463 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 CNDP1Q96KN2 507 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 XYLT2Q9H1B5 865 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 CAB39LQ9H9S4 337 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 SNX15Q9NRS6 342 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 C20orf96Q9NUD7 363 aaPredicted RBP10.54□□□□□ -0.72
CLIP4-208ENST00000456385 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 VPS28Q9UK41 221 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 SNX13Q9Y5W8 968 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 ARID2Q68CP9 1835 aa10.54□□□□□ -0.72
CLIP4-208ENST00000456385 FUOMA2VDF0 154 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 KLRG2A4D1S0 409 aaPredicted RBP10.53□□□□□ -0.72
CLIP4-208ENST00000456385 H0YCG3 227 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 PSMD12O00232 456 aaPredicted RBP10.53□□□□□ -0.72
CLIP4-208ENST00000456385 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
CLIP4-208ENST00000456385 PLA2G6O60733 806 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 CBFA2T3O75081 653 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 VAPBO95292 243 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 MGAT1P26572 445 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 GABRB3P28472 473 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 PGGT1BP53609 377 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 ITGA7Q13683 1181 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 STRIP1Q5VSL9 837 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 NXNQ6DKJ4 435 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 RSBN1LQ6PCB5 846 aaPredicted RBP10.53□□□□□ -0.72
CLIP4-208ENST00000456385 XKR5Q6UX68 686 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 WDR49Q8IV35 697 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 BRSK2Q8IWQ3 736 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 FIBCD1Q8N539 461 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 FAM47BQ8NA70 645 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 ARNTL2Q8WYA1 636 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 DLG3Q92796 817 aa10.53□□□□□ -0.72
CLIP4-208ENST00000456385 MCRS1Q96EZ8 462 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms