RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CPOXP36551 454 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ABL2P42684 1182 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 NUMBP49757 651 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 HK2P52789 917 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 BTKQ06187 659 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 TMEM62Q0P6H9 643 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 AP1B1Q10567 949 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 NAA25Q14CX7 972 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ZRSR2Q15696 482 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 SYPL2Q5VXT5 272 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ITPRIPL1Q6GPH6 555 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 PM20D1Q6GTS8 502 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 AAGABQ6PD74 315 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 RASSF3Q86WH2 238 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 MYLK4Q86YV6 388 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 CCDC117Q8IWD4 279 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 LMNTD2Q8IXW0 634 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 SIX6OS1Q8N1H7 587 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ARRDC4Q8NCT1 418 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 RBM15BQ8NDT2 890 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 DNAJC9Q8WXX5 260 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 FAM136AQ96C01 138 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 TSGA13Q96PP4 275 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 SORT1Q99523 831 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 CSNK1G1Q9HCP0 422 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 NSMCE4AQ9NXX6 385 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 COPG2Q9UBF2 871 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 MID2Q9UJV3 735 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 PSAT1Q9Y617 370 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 HHLA1C9JL84 531 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 BEST1O76090 585 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 CYP2C18P33260 490 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 POLD2P49005 469 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 CXCR3P49682 368 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 CPT1AP50416 773 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 TKTL1P51854 596 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 PRKAA2P54646 552 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 SESN2P58004 480 aaPredicted RBP12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 ACTR3P61158 418 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 LBRQ14739 615 aaKnown RBP12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 RCN1Q15293 331 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 TMCO4Q5TGY1 634 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 METTL21CQ5VZV1 264 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 IRGCQ6NXR0 463 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 BHLHA9Q7RTU4 235 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 FAM35AQ86V20 835 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 SCUBE1Q8IWY4 988 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 UNC5BQ8IZJ1 945 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 ZSCAN18Q8TBC5 510 aaPredicted RBP12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 RDH11Q8TC12 318 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 KCNV2Q8TDN2 545 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 WDR60Q8WVS4 1066 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 PGBD4Q96DM1 585 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 BFARQ9NZS9 450 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 ZFATQ9P243 1243 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 ARMCX1Q9P291 453 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 CDH9Q9ULB4 789 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 SOX13Q9UN79 622 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 LRCH1Q9Y2L9 728 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 PCDHB12Q9Y5F1 795 aa12.82□□□□□ -0.36
ECHDC1-209ENST00000454591 CCDC195A0A1B0GUA6 201 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 NRP1O14786 923 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 TIMM44O43615 452 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 ITM2AO43736 263 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 CCNT2O60583 730 aaKnown RBP12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 FKBP6O75344 327 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 KRT36O76013 467 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 LTFP02788 710 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 APOA4P06727 396 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 ENO1P06733 434 aaKnown RBP12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 GNAT1P11488 350 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 IBSPP21815 317 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 SERPINB6P35237 376 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 ABCE1P61221 599 aaKnown RBP12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 RPL10AP62906 217 aaKnown RBP12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 PDE1BQ01064 536 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 ARL13BQ3SXY8 428 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 ANKRD20A4Q4UJ75 823 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 C6orf163Q5TEZ5 329 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 KIAA0319Q5VV43 1072 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 SNX30Q5VWJ9 437 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 WSCD1Q658N2 575 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 ANO7Q6IWH7 933 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 CASC4Q6P4E1 433 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 LRRC74BQ6ZQY2 392 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 HFE2Q6ZVN8 426 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 PID1Q7Z2X4 250 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 RNF169Q8NCN4 708 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 ZMIZ2Q8NF64 920 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 PPP4R1Q8TF05 950 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 STMN2Q93045 179 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 SENP8Q96LD8 212 aa12.81□□□□□ -0.36
ECHDC1-209ENST00000454591 FCRL3Q96P31 734 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms