RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 HTRA3P83110 453 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 PPIDQ08752 370 aaKnown RBP12.07□□□□□ -0.48
VTA1-203ENST00000452973 CRYMQ14894 314 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 CTXN3Q4LDR2 81 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
VTA1-203ENST00000452973 ARNTL2Q8WYA1 636 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 GOLGA8TH3BQL2 631 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 IRAK2O43187 625 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 TBX18O95935 607 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 HMBSP08397 361 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 MX2P20592 715 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 CCR1P32246 355 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 CD68P34810 354 aaPredicted RBP12.07□□□□□ -0.48
VTA1-203ENST00000452973 GMPRP36959 345 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 USP46P62068 366 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 CDK16Q00536 496 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 CERCAMQ5T4B2 595 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 LRRC8DQ7L1W4 858 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 MIB1Q86YT6 1006 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 KIF2BQ8N4N8 673 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 SPATA22Q8NHS9 363 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 TXNDC16Q9P2K2 825 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 PRKAG3Q9UGI9 489 aa12.07□□□□□ -0.48
VTA1-203ENST00000452973 TSC2P49815 1807 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 A0A0G2JND7 137 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 ARHGEF37A1IGU5 675 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 HMX2A2RU54 273 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 FAM159BA6NKW6 160 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 RFPL1O75677 317 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 CPB1P15086 417 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 TYMPP19971 482 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 LACTB2Q53H82 288 aaPredicted RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 ZNF669Q96BR6 464 aaPredicted RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 GRAMD1AQ96CP6 724 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 GPR62Q9BZJ7 368 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 ECT2Q9H8V3 914 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 SLC40A1Q9NP59 571 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 SSU72Q9NP77 194 aaKnown RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 ZFATQ9P243 1243 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 TRIM33Q9UPN9 1127 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 STARD13Q9Y3M8 1113 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 SF3B1O75533 1304 aaKnown RBP eCLIP12.06□□□□□ -0.487e-7■■■■■ 119.6
VTA1-203ENST00000452973 TNFRSF10BO14763 440 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 NCAM2O15394 837 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 PDE1BQ01064 536 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 DSC1Q08554 894 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 SH2D5Q6ZV89 423 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 TFAP2DQ7Z6R9 452 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 RASSF3Q86WH2 238 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 CDKL2Q92772 493 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 ERP27Q96DN0 273 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 SEPT5Q99719 369 aaPredicted RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 GORASP1Q9BQQ3 440 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 MOCS1Q9NZB8 636 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 IGSF9Q9P2J2 1179 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 VANGL2Q9ULK5 521 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 PCDHB7Q9Y5E2 793 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 NBNO60934 754 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 MT-CYBP00156 380 aaPredicted RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 POLBP06746 335 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 MLNP12872 115 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 PGAM1P18669 254 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 SERPINB4P48594 390 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 HCAR3P49019 387 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 TUBP50607 506 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 NEK3P51956 506 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 SLC18A2Q05940 514 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 EFEMP1Q12805 493 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 C16orf46Q6P387 395 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 DCP1BQ8IZD4 617 aaKnown RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 MFSD3Q96ES6 412 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 FCRL3Q96P31 734 aaPredicted RBP12.06□□□□□ -0.48
VTA1-203ENST00000452973 TSSK1BQ9BXA7 367 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 PRDM16Q9HAZ2 1276 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 BFARQ9NZS9 450 aa12.06□□□□□ -0.48
VTA1-203ENST00000452973 PQBP1O60828 265 aaKnown RBP12.05□□□□□ -0.48
VTA1-203ENST00000452973 CAPN15O75808 1086 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 NEBLO76041 1014 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 UPP2O95045 317 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 GALNT2Q10471 571 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 MGAT5BQ3V5L5 792 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 FYB2Q5VWT5 728 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 C14orf80Q86SX3 495 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 ZNF276Q8N554 614 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 ATPAF2Q8N5M1 289 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 AZIN2Q96A70 460 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 HDAC11Q96DB2 347 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 SCLYQ96I15 445 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 MLPHQ9BV36 600 aaPredicted RBP12.05□□□□□ -0.48
VTA1-203ENST00000452973 VPS11Q9H270 941 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 RXFP1Q9HBX9 757 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 CHRAC1Q9NRG0 131 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 GMIPQ9P107 970 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 ZNF180Q9UJW8 692 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 LRFN2Q9ULH4 789 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms