RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 USP36Q9P275 1121 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 VANGL2Q9ULK5 521 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 MUC22E2RYF6 1773 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 IGHV1OR15-9A0A0B4J2B8 117 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 GYPCP04921 128 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 ATP5BP06576 529 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 SKILP12757 684 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 HLA-EP13747 358 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 POLR2EP19388 210 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 TNFAIP3P21580 790 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 RRM1P23921 792 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 ADRA1BP35368 520 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 CTSOP43234 321 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 RPL7AP62424 266 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 OGDHQ02218 1023 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 NRG1Q02297 640 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 MAMLD1Q13495 774 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 SLC12A1Q13621 1099 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 ASIC2Q16515 512 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 ACBD5Q5T8D3 534 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 C11orf74Q86VG3 221 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 FAM131BQ86XD5 332 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 DNAAF5Q86Y56 855 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 FEM1AQ9BSK4 669 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 XPO4Q9C0E2 1151 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 SIK2Q9H0K1 926 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 CD93Q9NPY3 652 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 PRSS16Q9NQE7 514 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 NCDNQ9UBB6 729 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 RAB23Q9ULC3 237 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 PLA2G4CQ9UP65 541 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 NEU3Q9UQ49 428 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 PCDHGA5Q9Y5G8 931 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 CKAP5Q14008 2032 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 LAMA1P25391 3075 aa16.61■□□□□ 0.25
SCAMP4-205ENST00000452128 DNAH14Q0VDD8 3507 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 C10orf142B7Z368 130 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 GOLGA6L19H0YKK7 550 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 CLDN11O75508 207 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ASLP04424 464 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 HNRNPH3P31942 346 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ZNF143P52747 638 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 CDH4P55283 916 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 TPM4P67936 248 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ZBED6P86452 979 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ATP11AP98196 1134 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 CDH18Q13634 790 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 CSRP2Q16527 193 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 SPDYCQ5MJ68 293 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 SERPINA13PQ6UXR4 307 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 TMPRSS6Q8IU80 811 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ERLEC1Q96DZ1 483 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 RPRD1AQ96P16 312 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ISCUQ9H1K1 167 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 OSBPL2Q9H1P3 480 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 SLCO3A1Q9UIG8 710 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 GMEB2Q9UKD1 530 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 NENFQ9UMX5 172 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ERVW-1Q9UQF0 538 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 ITIH6Q6UXX5 1313 aa16.6■□□□□ 0.25
SCAMP4-205ENST00000452128 H0Y626 953 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 RHOBTB1O94844 696 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 FTLP02792 175 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 SRPRAP08240 638 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 ZNF806P0C7X5 589 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 SDC4P31431 198 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 ECT2LQ008S8 904 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 KLHL30Q0D2K2 578 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 SPEM2Q0P670 501 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 SCAPQ12770 1279 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 HNRNPA1L2Q32P51 320 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 C9orf64Q5T6V5 341 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.255e-8■□□□□ 11
SCAMP4-205ENST00000452128 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 KIAA2013Q8IYS2 634 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 ARFGAP1Q8N6T3 406 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 OR2T3Q8NH03 318 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 FRS2Q8WU20 508 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 IQCDQ96DY2 449 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 PSMB7Q99436 277 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 ARRDC1-AS1Q9H2J1 176 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 MTG2Q9H4K7 406 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 SEMA4GQ9NTN9 838 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 PPARGC1AQ9UBK2 798 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 PAXBP1Q9Y5B6 917 aa16.59■□□□□ 0.25
SCAMP4-205ENST00000452128 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.25
SCAMP4-205ENST00000452128 TYW5A2RUC4 315 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 TMEM191CA6NGB0 347 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 E9PAM4 449 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 FAM72CH0Y354 149 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 AP5Z1O43299 807 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF217O75362 1048 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 EPHX1P07099 455 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 GPD1P21695 349 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 OXCT1P55809 520 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms