RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 MINDY1Q8N5J2 469 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.39■■□□□ 1.17
C9orf3-208ENST00000451893 NEK11Q8NG66 645 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 OR8K1Q8NGG5 319 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 PPP1R13BQ96KQ4 1090 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 ZNF830Q96NB3 372 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-208ENST00000451893 DNAJC12Q9UKB3 198 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 GIPC1O14908 333 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 ASLP04424 464 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 FYNP06241 537 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 SLC2A3P11169 496 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 RPL34P49207 117 aaKnown RBP22.38■■□□□ 1.17
C9orf3-208ENST00000451893 COPAP53621 1224 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 RPS24P62847 133 aaKnown RBP22.38■■□□□ 1.17
C9orf3-208ENST00000451893 APBA1Q02410 837 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 ZC3H12AQ5D1E8 599 aaKnown RBP22.38■■□□□ 1.17
C9orf3-208ENST00000451893 MS4A13Q5J8X5 152 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 EFHC1Q5JVL4 640 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 RAP1GAP2Q684P5 730 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 NADSYN1Q6IA69 706 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 BEND5Q7L4P6 421 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 TMEM110Q86TL2 294 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 CFAP52Q8N1V2 620 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 ZCCHC9Q8N567 271 aaKnown RBP22.38■■□□□ 1.17
C9orf3-208ENST00000451893 CADM4Q8NFZ8 388 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 FIBINQ8TAL6 211 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 WFDC5Q8TCV5 224 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 SHC3Q92529 594 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 BTN2A3PQ96KV6 586 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 PRICKLE1Q96MT3 831 aaPredicted RBP22.38■■□□□ 1.17
C9orf3-208ENST00000451893 TTYH3Q9C0H2 523 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 DDIT4Q9NX09 232 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 NCKAP1Q9Y2A7 1128 aa22.38■■□□□ 1.17
C9orf3-208ENST00000451893 ASCC3Q8N3C0 2202 aaKnown RBP22.38■■□□□ 1.17
C9orf3-208ENST00000451893 A0A1B0GTW7 788 aa22.37■■□□□ 1.17
C9orf3-208ENST00000451893 LUC7L3O95232 432 aaKnown RBP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 PMLP29590 882 aa22.37■■□□□ 1.17
C9orf3-208ENST00000451893 RDXP35241 583 aaKnown RBP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 BPIFB4P59827 614 aa22.37■■□□□ 1.17
C9orf3-208ENST00000451893 KCNMA1Q12791 1236 aa22.37■■□□□ 1.17
C9orf3-208ENST00000451893 CAMK2GQ13555 558 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 ZNF776Q68DI1 518 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 C1orf131Q8NDD1 294 aaKnown RBP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 BAG1Q99933 345 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 TMEM245Q9H330 911 aa22.37■■□□□ 1.17
C9orf3-208ENST00000451893 CAPN10Q9HC96 672 aa22.37■■□□□ 1.17
C9orf3-208ENST00000451893 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 KIAA1522Q9P206 1035 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-208ENST00000451893 CYTH4Q9UIA0 394 aa22.37■■□□□ 1.17
C9orf3-208ENST00000451893 ARHGAP6O43182 974 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 HSF2BPO75031 334 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 GRAP2O75791 330 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 TACR2P21452 398 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 FECHP22830 423 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 NNMTP40261 264 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 CSKP41240 450 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 ADKP55263 362 aaKnown RBP22.36■■□□□ 1.17
C9orf3-208ENST00000451893 CCZ1BP86790 482 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 CCZ1P86791 482 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-208ENST00000451893 SFSWAPQ12872 951 aaKnown RBP22.36■■□□□ 1.17
C9orf3-208ENST00000451893 RABGAP1LQ5R372 815 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 DEFB106AQ8N104 65 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 CPLX3Q8WVH0 158 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 SLC39A13Q96H72 371 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 DNAJC7Q99615 494 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 BTBD1Q9H0C5 482 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 ZNHIT6Q9NWK9 470 aaKnown RBP22.36■■□□□ 1.17
C9orf3-208ENST00000451893 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.36■■□□□ 1.17
C9orf3-208ENST00000451893 PCDHGC3Q9UN70 934 aa22.36■■□□□ 1.17
C9orf3-208ENST00000451893 GLI1P08151 1106 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 CCR1P32246 355 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 NME3Q13232 169 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 PTPRNQ16849 979 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 TMTC1Q8IUR5 882 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 KIAA1524Q8TCG1 905 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 CPXM1Q96SM3 734 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 ZDHHC5Q9C0B5 715 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 PRSS16Q9NQE7 514 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 MYO6Q9UM54 1294 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 PCDHB9Q9Y5E1 797 aa22.35■■□□□ 1.17
C9orf3-208ENST00000451893 METTL12A8MUP2 240 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 BCAT2O15382 392 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-208ENST00000451893 ZBTB16Q05516 673 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 ST3GAL2Q16842 350 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 PITRM1Q5JRX3 1037 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 FAM183BPQ6ZVS7 135 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 KIAA0907Q7Z7F0 614 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-208ENST00000451893 MSANTD4Q8NCY6 345 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 OR2I1PQ8NGU4 316 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 SYN2Q92777 582 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-208ENST00000451893 KCND1Q9NSA2 647 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 ABHD10Q9NUJ1 306 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 ASNSD1Q9NWL6 643 aa22.34■■□□□ 1.17
C9orf3-208ENST00000451893 EIF2B4Q9UI10 523 aaKnown RBP22.34■■□□□ 1.17
C9orf3-208ENST00000451893 XPO7Q9UIA9 1087 aaKnown RBP22.34■■□□□ 1.17
C9orf3-208ENST00000451893 TPRP12270 2363 aaKnown RBP22.33■■□□□ 1.17
C9orf3-208ENST00000451893 MUC22E2RYF6 1773 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-208ENST00000451893 KCNU1A8MYU2 1149 aa22.33■■□□□ 1.17
C9orf3-208ENST00000451893 ZNF500O60304 480 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-208ENST00000451893 SEMA4FO95754 770 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms