RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PBX3P40426 434 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 MAGEA6P43360 314 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 SLC18A1P54219 525 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 IRF9Q00978 393 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 PDE1CQ14123 709 aaPredicted RBP15.18■□□□□ 0.02
SF1-211ENST00000448404 HSP90AA5PQ58FG0 334 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 N4BP2L1Q5TBK1 243 aaPredicted RBP15.18■□□□□ 0.02
SF1-211ENST00000448404 RGMBQ6NW40 437 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 TAF2Q6P1X5 1199 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 PACS1Q6VY07 963 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 NUDCD3Q8IVD9 361 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 PLD6Q8N2A8 252 aaKnown RBP15.18■□□□□ 0.02
SF1-211ENST00000448404 TRIM55Q9BYV6 548 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 FETUBQ9UGM5 382 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 EMCNQ9ULC0 261 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 PDCD11Q14690 1871 aaKnown RBP15.18■□□□□ 0.02
SF1-211ENST00000448404 TROVE2P10155 538 aaKnown RBP eCLIP15.18■□□□□ 0.02
SF1-211ENST00000448404 CYBAP13498 195 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 CCNB1P14635 433 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 ZFXP17010 805 aaPredicted RBP15.18■□□□□ 0.02
SF1-211ENST00000448404 TPSB2P20231 275 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 TPSAB1Q15661 275 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 RASSF3Q86WH2 238 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 SPATA6LQ8N4H0 392 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 PPP1R36Q96LQ0 422 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 PNPLA8Q9NP80 782 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 FBXW11Q9UKB1 542 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 NDC80O14777 642 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 PDE1BQ01064 536 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 RCN2Q14257 317 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 LPIN1Q14693 890 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 VWA5B1Q5TIE3 1220 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 BNIPLQ7Z465 357 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 SERINC5Q86VE9 423 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 DQX1Q8TE96 717 aaKnown RBP15.17■□□□□ 0.02
SF1-211ENST00000448404 PHACTR1Q9C0D0 580 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 UNC80Q8N2C7 3258 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 C9IYK1 514 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 GSRP00390 522 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 CD1EP15812 388 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 ALDH3A1P30838 453 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 GRK4P32298 578 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 CCR10P46092 362 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 CCNHP51946 323 aaPredicted RBP15.17■□□□□ 0.02
SF1-211ENST00000448404 GJA9P57773 515 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 PDK1Q15118 436 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 DDR2Q16832 855 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 TREML1Q86YW5 311 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 CNTD1Q8N815 330 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 KCTD13Q8WZ19 329 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 E2F7Q96AV8 911 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 TMEM216Q9P0N5 145 aa15.17■□□□□ 0.02
SF1-211ENST00000448404 ABT1Q9ULW3 272 aaKnown RBP15.17■□□□□ 0.02
SF1-211ENST00000448404 SMAPO00193 183 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 C2CD2LO14523 706 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 KRT38O76015 456 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 TBX18O95935 607 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 AQP5P55064 265 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 ARPP19P56211 112 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 RSPH3Q86UC2 560 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 FAM13CQ8NE31 585 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 TRPV6Q9H1D0 765 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 NMUR1Q9HB89 426 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 XAB2Q9HCS7 855 aaKnown RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 ABI2Q9NYB9 513 aaPredicted RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 ZFATQ9P243 1243 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 CPSF2Q9P2I0 782 aaKnown RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 NOD1Q9Y239 953 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 AVPR1AP37288 418 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 ALDH18A1P54886 795 aaKnown RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 UBAP2LQ14157 1087 aaKnown RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 ZNF460Q14592 562 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 RINLQ6ZS11 566 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 GBP7Q8N8V2 638 aaPredicted RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 CASP10Q92851 521 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 ALKBH8Q96BT7 664 aaKnown RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 PPCSQ9HAB8 311 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 SSU72Q9NP77 194 aaKnown RBP15.16■□□□□ 0.02
SF1-211ENST00000448404 OSER1Q9NX31 292 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 DNAJB4Q9UDY4 337 aa15.16■□□□□ 0.02
SF1-211ENST00000448404 CFAP73A6NFT4 308 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 MANSC4A6NHS7 340 aaPredicted RBP15.15■□□□□ 0.02
SF1-211ENST00000448404 FCHO1O14526 889 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 DDHD2O94830 711 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 PRKCGP05129 697 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 ITGA2BP08514 1039 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 NMBRP28336 390 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 GATMP50440 423 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 SEMA3BQ13214 749 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 BIRC2Q13490 618 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 PEX6Q13608 980 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 FASTKD1Q53R41 847 aaKnown RBP15.15■□□□□ 0.02
SF1-211ENST00000448404 TLDC1Q6P9B6 456 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 LRRC8BQ6P9F7 803 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 SMARCD1Q96GM5 515 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 CLPTM1LQ96KA5 538 aa15.15■□□□□ 0.02
SF1-211ENST00000448404 PPARGC1AQ9UBK2 798 aaKnown RBP15.15■□□□□ 0.02
SF1-211ENST00000448404 DIAPH2O60879 1101 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms