RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 CXorf21Q9HAI6 301 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 COL20A1Q9P218 1284 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 FAM32AQ9Y421 112 aaKnown RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 VAPBO95292 243 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 OXSR1O95747 527 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ALDH2P05091 517 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 MPSTP25325 297 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 POLR2BP30876 1174 aaKnown RBP16.39■□□□□ 0.21
CNOT3-204ENST00000447684 TRPC3Q13507 836 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 SPIDRQ14159 915 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 CYP2A13Q16696 494 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ZBED5Q49AG3 693 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ZBTB49Q6ZSB9 765 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 C4orf19Q8IY42 314 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 SLC7A5P1Q8MH63 180 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ZNF597Q96LX8 424 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 SLC8A2Q9UPR5 921 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 METTL18O95568 372 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ITGBL1O95965 494 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-204ENST00000447684 HMGCRP04035 888 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ABCG1P45844 678 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 CCR10P46092 362 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 HARS2P49590 506 aaKnown RBP16.39■□□□□ 0.21
CNOT3-204ENST00000447684 BCAR1P56945 870 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 CLDN10P78369 228 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 CREB5Q02930 508 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 GNA12Q03113 381 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 EML3Q32P44 896 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 LSM12Q3MHD2 195 aaKnown RBP16.39■□□□□ 0.21
CNOT3-204ENST00000447684 SLC2A7Q6PXP3 512 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 CES3Q6UWW8 571 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 TMEM26Q6ZUK4 368 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 TAS1R3Q7RTX0 852 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 HACE1Q8IYU2 909 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ACO2Q99798 780 aaKnown RBP16.39■□□□□ 0.21
CNOT3-204ENST00000447684 ZC3H12CQ9C0D7 883 aaKnown RBP16.39■□□□□ 0.21
CNOT3-204ENST00000447684 SDCBP2Q9H190 292 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 PCDHA11Q9Y5I1 949 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 NR2E3Q9Y5X4 410 aa16.39■□□□□ 0.21
CNOT3-204ENST00000447684 A0A087WXM4 84 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 CHRNGP07510 517 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 GNAO1P09471 354 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 AARS2Q5JTZ9 985 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 PGAM4Q8N0Y7 254 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TBC1D15Q8TC07 691 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 CDKL2Q92772 493 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 PEBP4Q96S96 227 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 MSTO1Q9BUK6 570 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 NAA50Q9GZZ1 169 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 SYNPO2Q9UMS6 1093 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 PCDHB12Q9Y5F1 795 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 SAC3D1A6NKF1 404 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 GRAP2O75791 330 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TRUB2O95900 331 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 IGBP1P78318 339 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TRAF2Q12933 501 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 NME3Q13232 169 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TFDP2Q14188 446 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TMEM214Q6NUQ4 689 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 DNAJC14Q6Y2X3 702 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TMEM110Q86TL2 294 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 CMASQ8NFW8 434 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 RP9Q8TA86 221 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 FRMD8Q9BZ67 464 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 CNTN6Q9UQ52 1028 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 GPC6Q9Y625 555 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 H3BMQ9 156 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 HTRA2O43464 458 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 MYL6P60660 151 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TUBA4AP68366 448 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 RALGDSQ12967 914 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 RWDD4Q6NW29 188 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 TIFABQ6ZNK6 161 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 COG8Q96MW5 612 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 DHX35Q9H5Z1 703 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 RPF2Q9H7B2 306 aaKnown RBP16.38■□□□□ 0.21
CNOT3-204ENST00000447684 EFCAB1Q9HAE3 211 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 GID8Q9NWU2 228 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 ITGB1BP2Q9UKP3 347 aa16.38■□□□□ 0.21
CNOT3-204ENST00000447684 C1orf232A0A0U1RR37 186 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 NFIBO00712 420 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 BMP10O95393 424 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 CCNE2O96020 404 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 PRKCGP05129 697 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 BMXP51813 675 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 DPYSQ14117 519 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 TAZQ16635 292 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 RGS21Q2M5E4 152 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 C15orf59Q2T9L4 293 aaPredicted RBP16.37■□□□□ 0.21
CNOT3-204ENST00000447684 KCNT2Q6UVM3 1135 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 NIPA1Q7RTP0 329 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 HERC6Q8IVU3 1022 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 SAMD3Q8N6K7 520 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 TRPC4APQ8TEL6 797 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 CPXM1Q96SM3 734 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 NTPCRQ9BSD7 190 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms