RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.56□□□□□ -0.56
PTCH2-203ENST00000447098 KRT34O76011 436 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 LTFP02788 710 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 STX3Q13277 289 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 TCEAL1Q15170 157 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 ACBD5Q5T8D3 534 aaPredicted RBP11.56□□□□□ -0.56
PTCH2-203ENST00000447098 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 UBE2OQ9C0C9 1292 aaKnown RBP11.56□□□□□ -0.56
PTCH2-203ENST00000447098 HOXA2O43364 376 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 HNRNPRO43390 633 aaKnown RBP11.56□□□□□ -0.56
PTCH2-203ENST00000447098 KRT38O76015 456 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 ERBB2P04626 1255 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 RPLP2P05387 115 aaKnown RBP11.56□□□□□ -0.56
PTCH2-203ENST00000447098 SLC18A1P54219 525 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 WNT7BP56706 349 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 LILRA4P59901 499 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 PLEKHG4Q58EX7 1191 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 POU5F2Q8N7G0 328 aa11.56□□□□□ -0.56
PTCH2-203ENST00000447098 ARL5CA6NH57 179 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 LRG1P02750 347 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 MX2P20592 715 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 CCNFP41002 786 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 KRT72Q14CN4 511 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 CNGA3Q16281 694 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 SPDYAQ5MJ70 313 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 GANCQ8TET4 914 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 GDPD5Q8WTR4 605 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 PRR11Q96HE9 360 aaPredicted RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 SRPK1Q96SB4 655 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TRIM62Q9BVG3 475 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 DSEQ9UL01 958 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TYROBPO43914 113 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TSPAN3O60637 253 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 VAV1P15498 845 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 MMP8P22894 467 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 RECQLP46063 649 aaPredicted RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 HARS2P49590 506 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 CDC16Q13042 620 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 PDK1Q15118 436 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 LRRC8DQ7L1W4 858 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 GSTCDQ8NEC7 633 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ZNF296Q8WUU4 475 aaPredicted RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 FAM136AQ96C01 138 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 NDUFA13Q9P0J0 144 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 GTF2IRD1Q9UHL9 959 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 IPO11Q9UI26 975 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 SOX13Q9UN79 622 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 DNAJC25-GNG10A0A024R161 153 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 F8W8V4 182 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 CILPO75339 1184 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 PDE5AO76074 875 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 SNRPAP09012 282 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 MBL2P11226 248 aaPredicted RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 MYL4P12829 197 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 PRAMEP78395 509 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 POU5F1BQ06416 359 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TUSC3Q13454 348 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ITPRIPL1Q6GPH6 555 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 PMF1Q6P1K2 205 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 LRRC52Q8N7C0 313 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 SLC4A11Q8NBS3 891 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 PHC3Q8NDX5 983 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ERLEC1Q96DZ1 483 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TRIM56Q9BRZ2 755 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 PHACTR1Q9C0D0 580 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 EBF3Q9H4W6 596 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ACSS3Q9H6R3 686 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 THEGQ9P2T0 379 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 UBA6A0AVT1 1052 aaPredicted RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 MYBPHLA2RUH7 354 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 USP12O75317 370 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 STAMBPO95630 424 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 CLPTM1O96005 669 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ELK3P41970 407 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 SLC25A3Q00325 362 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 CYLC2Q14093 348 aaPredicted RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TRIM74Q86UV6 250 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TRIM73Q86UV7 250 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ANKRD52Q8NB46 1076 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 AGR3Q8TD06 166 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 TFB1MQ8WVM0 346 aaKnown RBP11.55□□□□□ -0.56
PTCH2-203ENST00000447098 MECRQ9BV79 373 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ATXN3LQ9H3M9 355 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 KCNK4Q9NYG8 393 aa11.55□□□□□ -0.56
PTCH2-203ENST00000447098 ARHGAP10A1A4S6 786 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
PTCH2-203ENST00000447098 SIGLEC16A6NMB1 481 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 MAGEC1O60732 1142 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 ACRP10323 421 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 RPL17P18621 184 aaKnown RBP11.54□□□□□ -0.56
PTCH2-203ENST00000447098 KLRC2P26717 231 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 TLE2Q04725 743 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 TWF1Q12792 350 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 KBTBD12Q3ZCT8 623 aa11.54□□□□□ -0.56
PTCH2-203ENST00000447098 TTC39BQ5VTQ0 682 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms