RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 ZNF669Q96BR6 464 aaPredicted RBP12.92□□□□□ -0.34
TRO-215ENST00000445561 ZFP42Q96MM3 310 aa12.92□□□□□ -0.34
TRO-215ENST00000445561 TTC1Q99614 292 aa12.92□□□□□ -0.34
TRO-215ENST00000445561 APOL2Q9BQE5 337 aa12.92□□□□□ -0.34
TRO-215ENST00000445561 SNX15Q9NRS6 342 aa12.92□□□□□ -0.34
TRO-215ENST00000445561 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
TRO-215ENST00000445561 DICER1Q9UPY3 1922 aaKnown RBP12.92□□□□□ -0.34
TRO-215ENST00000445561 RRN3P2A6NIE6 340 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 DCLK1O15075 740 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 SIN3BO75182 1162 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 CIB2O75838 187 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 USP1O94782 785 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 SORBS2O94875 1100 aaKnown RBP12.91□□□□□ -0.34
TRO-215ENST00000445561 HOXD8P13378 290 aaPredicted RBP12.91□□□□□ -0.34
TRO-215ENST00000445561 ERCC2P18074 760 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 AOC1P19801 751 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 PTPN3P26045 913 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 GP5P40197 560 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 PEX19P40855 299 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 IDH3AP50213 366 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 CDK18Q07002 472 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 SNX17Q15036 470 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 SV2CQ496J9 727 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 DNAL1Q4LDG9 190 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 UBXN11Q5T124 520 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 STXBP5Q5T5C0 1151 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 NET1Q7Z628 596 aaPredicted RBP12.91□□□□□ -0.34
TRO-215ENST00000445561 DNAAF3Q8N9W5 541 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 GSTCDQ8NEC7 633 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 HNRNPABQ99729 332 aaKnown RBP12.91□□□□□ -0.34
TRO-215ENST00000445561 FERMT1Q9BQL6 677 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 SNX10Q9Y5X0 201 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 PLXNB2O15031 1838 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 RALGAPA2Q2PPJ7 1873 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 A0A088AWK7 358 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 CCDC78A2IDD5 438 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 YJEFN3A6XGL0 299 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 GOLGA8TH3BQL2 631 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 TREHO43280 583 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 FYNP06241 537 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
TRO-215ENST00000445561 PNPLA4P41247 253 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 ACTR3P61158 418 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 IRF9Q00978 393 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 PAFAH1B3Q15102 231 aaKnown RBP12.91□□□□□ -0.34
TRO-215ENST00000445561 STRA8Q7Z7C7 330 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 CCNJLQ8IV13 435 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 NPWQ8N729 165 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 PPP4R1Q8TF05 950 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 WNT8BQ93098 351 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 MOCOSQ96EN8 888 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 MFSD3Q96ES6 412 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 KCNK16Q96T55 309 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 TINF2Q9BSI4 451 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 YIPF3Q9GZM5 350 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 ACSS2Q9NR19 701 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 ZNF212Q9UDV6 495 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 STAP1Q9ULZ2 295 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 SOX13Q9UN79 622 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 IPPQ9Y573 584 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 TIMM13Q9Y5L4 95 aaPredicted RBP12.91□□□□□ -0.34
TRO-215ENST00000445561 NRCAMQ92823 1304 aa12.91□□□□□ -0.34
TRO-215ENST00000445561 ARHGAP42A6NI28 874 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 MAP3K7O43318 606 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ATP9BO43861 1147 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 BAG2O95816 211 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 RALBP11234 206 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ANPEPP15144 967 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 PGGT1BP53609 377 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 MRPS35P82673 323 aaKnown RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 USP4Q13107 963 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 TBCCQ15814 346 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 TRMT5Q32P41 509 aaKnown RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 CERCAMQ5T4B2 595 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 GPRIN1Q7Z2K8 1008 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 BNIPLQ7Z465 357 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 PSTKQ8IV42 348 aaKnown RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 PPFIBP2Q8ND30 876 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ACVR1CQ8NER5 493 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ULBP1Q9BZM6 244 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ABHD16BQ9H3Z7 469 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 MAN1C1Q9NR34 630 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 DLGAP2Q9P1A6 1054 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 IGSF9Q9P2J2 1179 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 PPM1HQ9ULR3 514 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 LRCH1Q9Y2L9 728 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 SBF1O95248 1867 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 LOC100653049A0A140TA62 436 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 SMIM35A0A1B0GVV1 85 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 MEIS3P2A8K0S8 358 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 F8W8V4 182 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 ZBTB24O43167 697 aaPredicted RBP12.9□□□□□ -0.34
TRO-215ENST00000445561 MAP3K13O43283 966 aa12.9□□□□□ -0.34
TRO-215ENST00000445561 STRNO43815 780 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms