RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PLEKHG6Q3KR16 790 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 N4BP2L1Q5TBK1 243 aaPredicted RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 DCAF12L1Q5VU92 463 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 NAA35Q5VZE5 725 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 PSAPL1Q6NUJ1 521 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 BNIPLQ7Z465 357 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 PHLDB2Q86SQ0 1253 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 ZNF683Q8IZ20 524 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 ATP6V0D2Q8N8Y2 350 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 NT5C3BQ969T7 300 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 ALG14Q96F25 216 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 RPL10LQ96L21 214 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 NOX5Q96PH1 765 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 TBCBQ99426 244 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 DDX50Q9BQ39 737 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 NUSAP1Q9BXS6 441 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 STK33Q9BYT3 514 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 C6orf106Q9H6K1 298 aaPredicted RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 LIMA1Q9UHB6 759 aaKnown RBP11.23□□□□□ -0.61
SF3A1-203ENST00000444440 SLCO3A1Q9UIG8 710 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 VANGL2Q9ULK5 521 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 PLA2G4CQ9UP65 541 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 ITIH6Q6UXX5 1313 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 CABIN1Q9Y6J0 2220 aa11.23□□□□□ -0.61
SF3A1-203ENST00000444440 H0Y626 953 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
SF3A1-203ENST00000444440 PAGE1O75459 146 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 CNTN5O94779 1100 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 ATP5BP06576 529 aaKnown RBP11.22□□□□□ -0.61
SF3A1-203ENST00000444440 SERPINF2P08697 491 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 ATP1A3P13637 1013 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 CCR1P32246 355 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 HOXD12P35452 270 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 MATKP42679 507 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 SULT1E1P49888 294 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 METAP1P53582 386 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 BPIFB4P59827 614 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 MYL5Q02045 173 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 SYCP1Q15431 976 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 STX1AQ16623 288 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 UAP1L1Q3KQV9 507 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 ALFQ53S48 1182 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 C9orf64Q5T6V5 341 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 FAM102AQ5T9C2 384 aaPredicted RBP11.22□□□□□ -0.61
SF3A1-203ENST00000444440 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 ERICH1Q86X53 443 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 RGL4Q8IZJ4 473 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 TMEM35BQ8NCS4 154 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 C1orf216Q8TAB5 229 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 DNASE2BQ8WZ79 361 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 RNF34Q969K3 372 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 C18orf8Q96DM3 657 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 CFAP57Q96MR6 1250 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 PCDHB18PQ96TA0 734 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 SYNCQ9H7C4 482 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 ARHGEF38Q9NXL2 777 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.22□□□□□ -0.61
SF3A1-203ENST00000444440 TMEM59LQ9UK28 342 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 SLC6A14Q9UN76 642 aa11.22□□□□□ -0.61
SF3A1-203ENST00000444440 A0A1B0GVM2 712 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 TYW5A2RUC4 315 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 TCAF2A6NFQ2 919 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 METTL12A8MUP2 240 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 GJB3O75712 270 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 TOP3BO95985 862 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 CYP1A1P04798 512 aaPredicted RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 ACADMP11310 421 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 ABCB4P21439 1286 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 SOX5P35711 763 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 CXCR3P49682 368 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 NOVA1P51513 510 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 PTP4A2Q12974 167 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 HNRNPA1L2Q32P51 320 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 C5orf22Q49AR2 442 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 SH3PXD2AQ5TCZ1 1133 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 ZDHHC17Q8IUH5 632 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 ZCCHC9Q8N567 271 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 MINDY1Q8N5J2 469 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 AOPEPQ8N6M6 819 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 EMC1Q8N766 993 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 DEFB124Q8NES8 71 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 SLC30A5Q8TAD4 765 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 PTPRN2Q92932 1015 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 PGAP3Q96FM1 320 aaPredicted RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 CNTNAP3BQ96NU0 1288 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 RPRD1AQ96P16 312 aaPredicted RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 FAM129BQ96TA1 746 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 ORAI3Q9BRQ5 295 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 NUP58Q9BVL2 599 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 GTPBP2Q9BX10 602 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 CNTNAP3Q9BZ76 1288 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 MAGEB5Q9BZ81 275 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 NAT10Q9H0A0 1025 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 TKTL2Q9H0I9 626 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms