RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SLC14A1Q13336 389 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLC12A1Q13621 1099 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 RAPGEF1Q13905 1077 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 C9orf64Q5T6V5 341 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 TTC39BQ5VTQ0 682 aaPredicted RBP20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 FBXL22Q6P050 247 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 ZDHHC17Q8IUH5 632 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 CCAR2Q8N163 923 aaKnown RBP20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 BTBD1Q9H0C5 482 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 COX16Q9P0S2 106 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLCO3A1Q9UIG8 710 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 ITIH6Q6UXX5 1313 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 A0A1B0GVM2 712 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 TARSL2A2RTX5 802 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 TCAF2A6NFQ2 919 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 TTC34A8MYJ7 566 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 SEMA4FO95754 770 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 UCHL3P15374 230 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 CYP11B1P15538 503 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 ANP32AP39687 249 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 MATKP42679 507 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 PLK1P53350 603 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 MTA1Q13330 715 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 TTC31Q49AM3 519 aaPredicted RBP20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 RABGAP1LQ5R372 815 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 OTUD1Q5VV17 481 aaPredicted RBP20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 USP30Q70CQ3 517 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 CIR1Q86X95 450 aaPredicted RBP20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 DHX40Q8IX18 779 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 TMEM35BQ8NCS4 154 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 RNF34Q969K3 372 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 ADAM33Q9BZ11 813 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 PABPC3Q9H361 631 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 SYNCQ9H7C4 482 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 SCML1Q9UN30 329 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLCO1B1Q9Y6L6 691 aa20.96■□□□□ 0.95
NCKIPSD-206ENST00000439518 PES1O00541 588 aaKnown RBP20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 GABRB2P47870 512 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 BNC1Q01954 994 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 NME3Q13232 169 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 AUHQ13825 339 aaKnown RBP20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 CXorf57Q6NSI4 855 aaKnown RBP20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 ENOX1Q8TC92 643 aaKnown RBP20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 IGSF8Q969P0 613 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 NT5C3BQ969T7 300 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 FAM129BQ96TA1 746 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 NPY6RQ99463 290 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 SGK2Q9HBY8 427 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 RRN3Q9NYV6 651 aa20.95■□□□□ 0.94
NCKIPSD-206ENST00000439518 EDDM13A0A1B0GTR0 161 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 SPAARA0A1B0GVQ0 90 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 M0QYT0 321 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 RNASEH1O60930 286 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 PDGFRAP16234 1089 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 MZF1P28698 734 aaPredicted RBP20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 SCNN1AP37088 669 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 STK19P49842 368 aaPredicted RBP20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 IRAK1P51617 712 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 CENPCQ03188 943 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 FOXC1Q12948 553 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 CST6Q15828 149 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 CDKAL1Q5VV42 579 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 RBM43Q6ZSC3 357 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 BIRC7Q96CA5 298 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 ALG14Q96F25 216 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 RPL10LQ96L21 214 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 STK33Q9BYT3 514 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 OSGEPQ9NPF4 335 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 PIGVQ9NUD9 493 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 TAB2Q9NYJ8 693 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 HS3ST4Q9Y661 456 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 IGF2RP11717 2491 aa20.94■□□□□ 0.94
NCKIPSD-206ENST00000439518 F8VZ95 297 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 PAGE1O75459 146 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 TOP3BO95985 862 aaKnown RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 TFE3P19532 575 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 CXCR3P49682 368 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 AFF3P51826 1226 aaKnown RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 OXCT1P55809 520 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 FAM193AP78312 1265 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 SIM1P81133 766 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 C5orf22Q49AR2 442 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 RNF219Q5W0B1 726 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 NOP9Q86U38 636 aaKnown RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 GPT2Q8TD30 523 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 SNX19Q92543 992 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 PTPRN2Q92932 1015 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 C18orf8Q96DM3 657 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 PGAP3Q96FM1 320 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 RPRD1AQ96P16 312 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 PDCL3Q9H2J4 239 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 FBXL12Q9NXK8 326 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 SERGEFQ9UGK8 458 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 VANGL2Q9ULK5 521 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 NCKAP1Q9Y2A7 1128 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 AKAP13Q12802 2813 aa20.93■□□□□ 0.94
NCKIPSD-206ENST00000439518 I6L893 689 aaPredicted RBP20.92■□□□□ 0.94
NCKIPSD-206ENST00000439518 MID1O15344 667 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms