RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 NCALDP61601 193 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 CRADDP78560 199 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 OCRLQ01968 901 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 STRA8Q7Z7C7 330 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 EXOC3L1Q86VI1 746 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 NUP93Q8N1F7 819 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZMAT2Q96NC0 199 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 TMEM237Q96Q45 408 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 IARS2Q9NSE4 1012 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 CCND3P30281 292 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 KPNA1P52294 538 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 MPP3Q13368 585 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 TIGD5Q53EQ6 642 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZNF618Q5T7W0 954 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ACAD11Q709F0 780 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC30A1Q9Y6M5 507 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ADGRA2Q96PE1 1338 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 MOXD2PA6NHM9 499 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 CBX4O00257 560 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 HCRTO43612 131 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 SH3BP5O60239 455 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 SNX3O60493 162 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 SNX2O60749 519 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC10A3P09131 477 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 FGFR1P11362 822 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 PTGIRP43119 386 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ALDH18A1P54886 795 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 CDH17Q12864 832 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 PARP6Q2NL67 630 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 FRA10AC1Q70Z53 315 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ARID3BQ8IVW6 561 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 MTBPQ96DY7 904 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 ARHGAP39Q9C0H5 1083 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 KIAA0100Q14667 2235 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
TRAPPC9-202ENST00000438773 RHOCP08134 193 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 CYP2C18P33260 490 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 SERPINB4P48594 390 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 ATXN1P54253 815 aaKnown RBP11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 OXCT1P55809 520 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 FAAP100Q0VG06 881 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 TMEM199Q8N511 208 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 TRIB2Q92519 343 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 CENPTQ96BT3 561 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 LRRC39Q96DD0 335 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 SGF29Q96ES7 293 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 RMDN2Q96LZ7 410 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 NDFIP2Q9NV92 336 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 CNTN3Q9P232 1028 aa11.83□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZNF831Q5JPB2 1677 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 CCDC189A1A4V9 331 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 CHEK2O96017 543 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 NQO1P15559 274 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 PTPN9P43378 593 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 CDK16Q00536 496 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 ART3Q13508 389 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 LAMB3Q13751 1172 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 HSP90AA5PQ58FG0 334 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 LGI2Q8N0V4 545 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 C12orf50Q8NA57 414 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 DDI1Q8WTU0 396 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZNF570Q96NI8 536 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 VAT1Q99536 393 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 IQCF3P0C7M6 154 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 GFAPP14136 432 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 WARSP23381 471 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 PGM1P36871 562 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 OGDHQ02218 1023 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 ITIH4Q14624 930 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 CRYMQ14894 314 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 FSCBQ5H9T9 825 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 MAP3K21Q5TCX8 1036 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 MAGEC3Q8TD91 643 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 ACBD6Q9BR61 282 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 THTPAQ9BU02 230 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 GPR63Q9BZJ6 419 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 C15orf41Q9Y2V0 281 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 TSPAN3O60637 253 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 AVILO75366 819 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZNF865P0CJ78 1059 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 IGFBP4P22692 258 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 IL1R2P27930 398 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 CASP2P42575 452 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 SCNN1BP51168 640 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 PDAP1Q13442 181 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 POLD3Q15054 466 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 MON1AQ86VX9 555 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 CRYBG2Q8N1P7 616 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 CARNMT1Q8N4J0 409 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 TCP10LQ8TDR4 215 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 TSPAN17Q96FV3 270 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 FCRL2Q96LA5 508 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms