RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 SGSHP51688 502 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 TKTL1P51854 596 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 SLC8A3P57103 927 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 DAB2P98082 770 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 E2F1Q01094 437 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 KCNJ12Q14500 433 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 PKDCCQ504Y2 493 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 ADGRF1Q5T601 910 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 MMAAQ8IVH4 418 aaKnown RBP14.61□□□□□ -0.07
LINC01088-201ENST00000437737 WFDC5Q8TCV5 224 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 ZNF578Q96N58 590 aaPredicted RBP14.61□□□□□ -0.07
LINC01088-201ENST00000437737 NIF3L1Q9GZT8 377 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 ERVMER34-1Q9H9K5 563 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 APOBEC3GQ9HC16 384 aaKnown RBP14.61□□□□□ -0.07
LINC01088-201ENST00000437737 HBS1LQ9Y450 684 aaKnown RBP14.61□□□□□ -0.07
LINC01088-201ENST00000437737 PCDHB1Q9Y5F3 818 aa14.61□□□□□ -0.07
LINC01088-201ENST00000437737 GOLGA6L3A6NEY3 463 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 IKBKBO14920 756 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 SLC28A2O43868 658 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 KLRC4O43908 158 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 SDC3O75056 442 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 LATS1O95835 1130 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 ZBED1O96006 694 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 MPOP05164 745 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 SLC8A1P32418 973 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 PSMD8P48556 350 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 HNRNPA1L2Q32P51 320 aaKnown RBP14.6□□□□□ -0.07
LINC01088-201ENST00000437737 ANO6Q4KMQ2 910 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 COBLL1Q53SF7 1204 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 HS1BP3Q53T59 392 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 RAB41Q5JT25 222 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 CEP135Q66GS9 1140 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 SND1Q7KZF4 910 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC01088-201ENST00000437737 MFN1Q8IWA4 741 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 ZNF557Q8N988 423 aaPredicted RBP14.6□□□□□ -0.07
LINC01088-201ENST00000437737 CCDC150Q8NCX0 1101 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 OR14C36Q8NHC7 312 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 TMC2Q8TDI7 906 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 KCNE4Q8WWG9 221 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 NDRG1Q92597 394 aaKnown RBP14.6□□□□□ -0.07
LINC01088-201ENST00000437737 BPIFA3Q9BQP9 254 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 ULBP1Q9BZM6 244 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 UBXN6Q9BZV1 441 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 STIM2Q9P246 746 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 STOML2Q9UJZ1 356 aa14.6□□□□□ -0.07
LINC01088-201ENST00000437737 TPX2Q9ULW0 747 aaKnown RBP14.6□□□□□ -0.07
LINC01088-201ENST00000437737 ATMQ13315 3056 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3DA0A087WVF3 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3IA0A087WXS9 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3EA0A087X179 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3KA0A087X1G2 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3FA6NER0 549 aaPredicted RBP14.59□□□□□ -0.07
LINC01088-201ENST00000437737 SMTNL1A8MU46 457 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3LB9A6J9 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 KLK10O43240 276 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 MSI1O43347 362 aaKnown RBP14.59□□□□□ -0.07
LINC01088-201ENST00000437737 NR3C1P04150 777 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 ASLP04424 464 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3HP0C7X1 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 ERCC5P28715 1186 aaPredicted RBP14.59□□□□□ -0.07
LINC01088-201ENST00000437737 ZNF165P49910 485 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 ADPRHP54922 357 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 GABREP78334 506 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 PROX2Q3B8N5 592 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3GQ6DHY5 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 ISM2Q6H9L7 571 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3CQ6IPX1 549 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 NAPEPLDQ6IQ20 393 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 RFWD3Q6PCD5 774 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 KANSL1Q7Z3B3 1105 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 SPATS2Q86XZ4 545 aaKnown RBP14.59□□□□□ -0.07
LINC01088-201ENST00000437737 SLC9A9Q8IVB4 645 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TBC1D3Q8IZP1 549 aaPredicted RBP14.59□□□□□ -0.07
LINC01088-201ENST00000437737 LSMEM2Q8N112 164 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 MFSD2AQ8NA29 543 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 EDEM1Q92611 657 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 MYO19Q96H55 970 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 MMRN2Q9H8L6 949 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 LRRC4Q9HBW1 653 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 DMAC2Q9NW81 257 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 FRMD4BQ9Y2L6 1034 aa14.59□□□□□ -0.07
LINC01088-201ENST00000437737 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.08
LINC01088-201ENST00000437737 BECN2A8MW95 431 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 SIGLEC6O43699 453 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 MAGEC1O60732 1142 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 WISP1O95388 367 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 CSKP41240 450 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 GCLMP48507 274 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 VAMP7P51809 220 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 PPP2CBP62714 309 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 PPP2CAP67775 309 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 TPM4P67936 248 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 VAC14Q08AM6 782 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 DPCR1Q3MIW9 517 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 MPP7Q5T2T1 576 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 C9orf64Q5T6V5 341 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 PIK3R6Q5UE93 754 aa14.58□□□□□ -0.08
LINC01088-201ENST00000437737 PRPF39Q86UA1 669 aaKnown RBP14.58□□□□□ -0.08
LINC01088-201ENST00000437737 CCDC117Q8IWD4 279 aaPredicted RBP14.58□□□□□ -0.08
LINC01088-201ENST00000437737 AADATQ8N5Z0 425 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms